Gene M446_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3013 
Symbol 
ID6129150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3332336 
End bp3333562 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID641643204 
Productmajor facilitator transporter 
Protein accessionYP_001769859 
Protein GI170741204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0393248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGGC CTGCGGACCA CGCAGCGGCG GGCGGCGTCG GCAGCGCCGC CCGAAAGGCG 
CTGTGGGGGT CGGCCATCGG CTACGCGATG GACGGGTTCG ATCTCATGAT CCTCGGTTTC
GCCCTCAAGG CGATATCCGC CGACCTGGGT CTGAGCGCGG CGCAGGGCGC CTCGCTGGTG
ACCGCGACGC TGATCGGCGC CGTGATCGGC GGCGTCGGCT TCGGCATGCT GTCGGACCGG
CTCGGCCGCG TCCGCGTCCT GACCTGGACC ATCGTGCTGT TCGCCGTCTT CACCGGCCTC
TGCGCCCTGG CGCGGGGCTA CTGGGACCTC CTGATCTATC GCACGGTCGC GGGGATCGGG
CTCGGCGGCG AGTTCGGCAT CGGCATGGCC CTCGTCGCCG AGGCGTGGCC CGCCTCCAAG
CGGGCCCGGG CGTCGTCCTA TGTCGGCCTG GGGTGGCAGT TCGGCGTGCT CGCGGCGGCT
CTCGCCACGC CCCTCCTGCT GCCGGTGATC GGCTGGCGCG GGATGTTCGC CCTCGGCGTC
CTCCCGGCGG TCGTCGCCTA TGTCATCCGC CACTCGCTGC ACGAGCCGGA CGTCTTCGTG
GCGGGCACGC AGAACAGGCC GAAGGAATCG GCGCTTCGCC TGCTGATCAA GGATGTCGAG
ACCGCGAAGC TCAGCCTCGG CATGGTCATC CTCTGCTCGG TTCAGAACTT CGGCTATTAC
GGCGTGATGA TCTGGCTGCC GAATTACTTG TCGACCCGGT TCGGCTTCGC GCTGACCCAG
TCGGCCGCCT GGACCGCGGT GACCATCGCC GGAATGGCGG TCGGGATCCT CTGCTTCGGC
CACCTCGCCG ACCGCATCGG CCGCCGCCCC GCCTTCTTCA TCTACATGCT CGGCGCGGCC
GTCATGGTGG TCCTGTACGC GCGCCTGACG GATCCCGTCC AGCTCCTCGT GGCGGGGGCG
GTCATGGGCC TCTTCGTCAA CGGCATGCTC GGCGGCTACG GCGCGCTGAT CAGCGAGCTC
TACCCGACCC CGGCCCGCGC CACGGCGCAG AACGTCCTGT TCAACATCGG CCGCGCCGTC
GGCGGGTTCG GGCCGGTCGT CGTCGGCGGT CTCGCCGCCA CCTCCAGCTT CGCATTCGCC
ATCGGGCTGC TGGCGGCCCT CTACCTCCTC GACATCGTTG CCCTGTGGCT GCTCATCCCC
GAGCGGCGCG GCGCCGAACT CGTGTAA
 
Protein sequence
MDGPADHAAA GGVGSAARKA LWGSAIGYAM DGFDLMILGF ALKAISADLG LSAAQGASLV 
TATLIGAVIG GVGFGMLSDR LGRVRVLTWT IVLFAVFTGL CALARGYWDL LIYRTVAGIG
LGGEFGIGMA LVAEAWPASK RARASSYVGL GWQFGVLAAA LATPLLLPVI GWRGMFALGV
LPAVVAYVIR HSLHEPDVFV AGTQNRPKES ALRLLIKDVE TAKLSLGMVI LCSVQNFGYY
GVMIWLPNYL STRFGFALTQ SAAWTAVTIA GMAVGILCFG HLADRIGRRP AFFIYMLGAA
VMVVLYARLT DPVQLLVAGA VMGLFVNGML GGYGALISEL YPTPARATAQ NVLFNIGRAV
GGFGPVVVGG LAATSSFAFA IGLLAALYLL DIVALWLLIP ERRGAELV