Gene M446_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2989 
Symbol 
ID6129086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp3307693 
End bp3308331 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID641643180 
Productputative cytochrome c oxidase subunit III protein 
Protein accessionYP_001769835 
Protein GI170741180 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.181607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0485026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TGCGCGCCGA GGCGCGACCC GCCCGGGCCG ACGCGCCGCG CGTGACCCGG 
GACGTCTCGG CCCTCCCGAC CTACGGCTTC GGCCCGACGA GCCCGATGTG GTGGGGCACG 
CTCGGCTTCT TCGTCGTCGA GGGCACCGGG TTCGCGCTCG CGCTCGGCGC CTGCTTCTAC 
CTGGTGCAGC AGAACCCGCA ATGGCCCCTG GCGCCGGCGC CGCCCGACCA CTGGGCCGGA 
ACCCTCAACA CGCTGCTCCT GCTCGCCAGC CTCTGGCCGA ACCGGGTGGC CGACCGCGAC 
GCGCAGGCGC TGGACCTCGG GCGCGTGCGG CGCGACCTCG TGATCATGTC CCTCGTCGCG 
ATCGCGGCGA CCGCCGTCCG GCTCTACGAG TTCACGGGCC TCGGCGTGAA CTGGGACCAG 
AACGCCTACG GCTCGATCAC CTGGGTGCTG CTCGGCCTGC ACCTGACGCA CCTGATCACC 
GATGCGGGCG ACACGCTGGT GCTCACCGCC CTGATGTTCA CGCGTCACGC GACCGGCAAG 
CGCTTCAGCG ACGTGAGCGA CAACGCCTTC TACTGGTACT TCGTCGTGCT GTCCTGGCTG 
CCGATCTACC TGGCCGTGTA CTGGCTGCCG CGCTGGTGA
 
Protein sequence
MSTLRAEARP ARADAPRVTR DVSALPTYGF GPTSPMWWGT LGFFVVEGTG FALALGACFY 
LVQQNPQWPL APAPPDHWAG TLNTLLLLAS LWPNRVADRD AQALDLGRVR RDLVIMSLVA 
IAATAVRLYE FTGLGVNWDQ NAYGSITWVL LGLHLTHLIT DAGDTLVLTA LMFTRHATGK 
RFSDVSDNAF YWYFVVLSWL PIYLAVYWLP RW