Gene M446_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2980 
Symbol 
ID6130874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3303748 
End bp3303969 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content64% 
IMG OID641643171 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001769826 
Protein GI170741171 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0073832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0936276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA TGATGAGCAC CGGCACCGTC AAGTGGTTCA ACGGCCAGAA GGGCTTTGGT 
TTCATTCAGC CGGACGACGG CGGCAAGGAC GTCTTCGTTC ACATCTCGGC CGTCGAGCGC
TCGGGCCTGC AGACCCTCTC CGAGGGCCAG AAGGTGTCCT ACGAGCTCGA GACCGATCGC
CGCAGCGGCA AGCAATCCGC CGGCAGCCTC CGGGCCGCGT AG
 
Protein sequence
MDTMMSTGTV KWFNGQKGFG FIQPDDGGKD VFVHISAVER SGLQTLSEGQ KVSYELETDR 
RSGKQSAGSL RAA