Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2964 |
Symbol | |
ID | 6130852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 3286601 |
End bp | 3288322 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641643155 |
Product | heparinase II/III family protein |
Protein accession | YP_001769810 |
Protein GI | 170741155 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.534511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.040363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCACTGGG GGCCTGACCG CTGGCGCTTC TACCGGCTCG TCGGGCGCGA GATCGGCCGC GCCGCCCGCT CCGCCATCCT CCACCTCTCC TCGGCGCCCT CGGCCTTCGC GCGGCTGCGG CCGACCGGCC TCGTCATCGC GCCCCAGGAC CTGCGCACCA GCGACGCCAC CCTGGCGGGC GACATCTACG CGGGCCTGTT CGTGTTCGCC GGCCGGGCCC TCGCCACGGG CGGGCGCTCG CCCTTCGACT TCACCCCGCC CTCGCCCGAA TGGGGGGAGG CGCTCTACGG GTTCGGCTGG CTGCGGCACC TGAGCGCCGC CGACAGCGCG CTCGCCCGCT CCAACGCCCG CGCCTTCGTG CAGGACTACC TCGCCGGGCG CGGCGACCGC GACATCGCGG ACCGGCCCGC CGTCGCGGCC CGCCGGCTGA TCTCGCTGCT CAGCCAGTCG CCCCTCGTCC TCGAAGGGGC GGACCACGCC TTCTACCAAG CCTTCCTGAA GGGGATCGGG CGCTGCGTGC GCCGCCTCGA CACGGCCCTG AGGCACGGCA TCCCGCCGCG CCAGCGCCTC GCCGCCGCGG TCGCGCTGAC CTATGCGGGC CTGTGCTGCG ACGGGTTCGA GCCGGTGCTG CGCCGGGGCG TGCGCCTCCT CTCCCGGGAG CTCACCCGGC AGATCCTGGC GGATGGCGGC CATCGCAGCC GCGACCCGGC GGCCGTGCAG GAACTCCTGC TCGACCTGCT GCCCCTGCGC CAGAGCTTCC TCAGCCGCGA CATCGCCCCG CCCGATCCGC TGCTCGTCGC GATCGACCGG ATGCTGCCCT TCCTGCGGCT GCTGCGCCAC GGGGACGCCT CCCTCGGCCA CCACAACGGC ATGGGGGCGA CGGAGGCCGA CCAGCTCGCG ACCCTGCTGA TCTACGACGG GGCGCTGGCC CGCCCGCTGA TGCACGCGCC CCACACCGGC TACGCGCGGC TGGAGGCGGG CCGCACGCTC CTCGTCGCGG ATATCGGCCC CGCGCCGCCG CTGGTCTACT CGACCGTGGC CGGGGCGGGC TGCCTGTCCT TCGAACTGTC GAGCGGCGCC CAGCGCCTCG TGGTCAATTG CGGCATGCCG GCGAGCGGCG ACGAGATGCG CCAGCTCGCC CGCACCACGG CGGCGCACTC GACCGCGGTG CTCGGAACCG CCTCGTCCTG CCGCTTCCTC AACCCGCCCG GGCCCGGCTT CGCGCACCCG ATCGCCGCCT GGCTGCGCCA CCGGATCGGG CCGGTGATCC TGCGCGGGCC GCTCCGGGTC CCGGTCGAGC GCGGCAGCGC GCCGGACGGC ACGGCGGTGC TCGCGGCGAG CCACGACGGC TACCTCGCGG GATTCGGGCT GATCCATGAG CGGCGCTGGC GCCTCGCGCC GGCGGGCGAC CTCCTGGAGG GCGAGGACGC CTTCCGGCGG CCGGAGCGGG AGGGGCGCGC CCGCGGCGCC GGCCGCCCGG TCGAGGCGGC GATCCGCTTC CACCTGCATC CCTCCCTGCG GGTGAGCCGG GAGGGCCGGG CGGTGCGCCT GCAGGGCGCG GGCGGCGAGG CGTGGCTGTT CGAGACCGAG GCGACCGATC CGGTGATCGA GGAGAGCGTC TTCTTCGCGG CCTCGAACGG CGCCCGGCGG ACCGAGCAGA TCGTGCTGCA CCTCAAGGTC GCGGACGGCA CCCGGCTGGC GTGGCGCTTC CGGCGCGCGT GA
|
Protein sequence | MHWGPDRWRF YRLVGREIGR AARSAILHLS SAPSAFARLR PTGLVIAPQD LRTSDATLAG DIYAGLFVFA GRALATGGRS PFDFTPPSPE WGEALYGFGW LRHLSAADSA LARSNARAFV QDYLAGRGDR DIADRPAVAA RRLISLLSQS PLVLEGADHA FYQAFLKGIG RCVRRLDTAL RHGIPPRQRL AAAVALTYAG LCCDGFEPVL RRGVRLLSRE LTRQILADGG HRSRDPAAVQ ELLLDLLPLR QSFLSRDIAP PDPLLVAIDR MLPFLRLLRH GDASLGHHNG MGATEADQLA TLLIYDGALA RPLMHAPHTG YARLEAGRTL LVADIGPAPP LVYSTVAGAG CLSFELSSGA QRLVVNCGMP ASGDEMRQLA RTTAAHSTAV LGTASSCRFL NPPGPGFAHP IAAWLRHRIG PVILRGPLRV PVERGSAPDG TAVLAASHDG YLAGFGLIHE RRWRLAPAGD LLEGEDAFRR PEREGRARGA GRPVEAAIRF HLHPSLRVSR EGRAVRLQGA GGEAWLFETE ATDPVIEESV FFAASNGARR TEQIVLHLKV ADGTRLAWRF RRA
|
| |