Gene M446_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2954 
Symbol 
ID6134149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3274963 
End bp3276654 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content69% 
IMG OID641643145 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_001769800 
Protein GI170741145 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0772192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC TGCGCCTCCC CGCCCTCGCG GCCCTCGCGC TCCTCGCCGC CGCCACCGCC 
GCGAGCGCGG CGGGTCCCGA CCTCGGCGCG GTCCAGAAGC AGAACCTGAA CTGGTCCGCC
ATCGGCATGT TCCTGCTGTT CGTGCTCGGC ACGCTCGGCA TCACCTACCG GGCCGCCGCG
CAGACCCGCT CGGCCGCCGA CTTCTACGCG GCGGGCGGCG GCATCTCGGC CGGCCAGAAC
GCGCTCGCCA TCGCGGGCGA CTACATGTCG GCGGCCTCGT TCCTGGGCAT CTCGGGCCTG
GTGTTCTCGT CGGGCTTCGA CGGGCTGATC TACTCGATCG GCTTCCTGGT CGGCTGGCCG
ATCGTGCTGT TCCTGATCGC CGAGCGGCTG CGCAACCTCG GCAAGTTCAC CTTCGCGGAC
GTGGCCTCGT TCCGCCTCGA CCAGACCCAG ATCCGGGTCC TGTCGGCCAC CGGCACCCTG
GTGGTGGTCG CCTTCTACCT GATCGCCCAG ATGGTCGGCG CCGGCAAATT GATCCAGCTC
CTGTTCGGCC TCGACTACCT CTACGCGGTG GTGCTGGTCG GCATCCTGAT GATCGTCTAC
GTCGCCTTCG GCGGCATGAA GGCGACGACC TGGGTGCAGA TCATCAAGGC CTGCCTGCTG
CTGGCGGGCG CGACCTTCAT GGCCCTGGCG GTGCTGTGGC GCTACGGCTT CAACCCGGAA
GCCCTGTTCG CCGCGGCGGT CAAGGAGCAT CCCAAGCACG ACGCCATCAT GGCGCCGGGC
GGCCTCGTCA GCGACCCGAT CTCGGCCATC TCGCTCGGCA TCGGCCTGAT GTTCGGCACC
GCCGGCCTGC CCCACATCCT GATGCGGTTC TTCACCGTCT CGGACGCGCA GGCGGCCCGC
AAGTCGGTGT TCTACGCGAC CGGCCTGATC GCCTACTTCT ACATCCTGAC CTTCATCATC
GGGTTCGGGG CGATCACCTT CCTGATGAAC GATCCCTCCT ACTTCAAGGC GGGGGCGGAC
GGCGCCTACG ACCGCATCGC CGGGCTGATC GGCGGCACCA ACATGGCGGC GGTCCACCTC
GCCAACGCCA CCGGGGGCGC GCTCTTCCTC GGCTTCATCT CGGCGGTGGC CTTCGCGACC
ATCCTGGCGG TGGTGGCGGG CCTGACCCTG GCGGGCGCCT CGGCGGTGAG CCACGACCTC
TACGCGCAGG TCATCGCCCG CGGCCGGACC TCCGAGCAGA AGGAGGTGCG CCTGTCGAAG
CTCTCCGCCG TGGTGATCGG CGTCGTGGCG ATCGTGCTCG GCTACGTCTT CGAGAACCAG
AACGTCGCCT TCATGGTCGG CCTCGCCTTC GCGGTGGCGG CGAGCTGCAA CTTTCCGGTC
CTGGCGATGT CGATCCTGTG GAAGGGCACG ACCACCACCG GCGCCCTGGT CGGGGGCCTC
GTCGGCCTGA TCACCGCGGT GGCGATGGTG GTGCTGTCGA AGGCGGTCTG GGTCTCGACC
CTGGGCTACT CCACGGCCCT GTTCCCCTAC GACAACCCGG CCCTGTTCTC GATGCCGATC
GCCTTCCTGG TGATCTGGGC GGTGTCGAAG GCCGACGCCA GCGCCCGGGC GCGCCGCGAG
CGCGACAGCT TCGAGGCCCA GTACGTGCGC TCGGAGACCG GCATCGGGGC CGCCACCGCC
CACGCCCATT GA
 
Protein sequence
MIRLRLPALA ALALLAAATA ASAAGPDLGA VQKQNLNWSA IGMFLLFVLG TLGITYRAAA 
QTRSAADFYA AGGGISAGQN ALAIAGDYMS AASFLGISGL VFSSGFDGLI YSIGFLVGWP
IVLFLIAERL RNLGKFTFAD VASFRLDQTQ IRVLSATGTL VVVAFYLIAQ MVGAGKLIQL
LFGLDYLYAV VLVGILMIVY VAFGGMKATT WVQIIKACLL LAGATFMALA VLWRYGFNPE
ALFAAAVKEH PKHDAIMAPG GLVSDPISAI SLGIGLMFGT AGLPHILMRF FTVSDAQAAR
KSVFYATGLI AYFYILTFII GFGAITFLMN DPSYFKAGAD GAYDRIAGLI GGTNMAAVHL
ANATGGALFL GFISAVAFAT ILAVVAGLTL AGASAVSHDL YAQVIARGRT SEQKEVRLSK
LSAVVIGVVA IVLGYVFENQ NVAFMVGLAF AVAASCNFPV LAMSILWKGT TTTGALVGGL
VGLITAVAMV VLSKAVWVST LGYSTALFPY DNPALFSMPI AFLVIWAVSK ADASARARRE
RDSFEAQYVR SETGIGAATA HAH