Gene M446_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2667 
Symbol 
ID6130000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2956640 
End bp2957953 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID641642881 
Productgeneral substrate transporter 
Protein accessionYP_001769540 
Protein GI170740885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.174811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGTC CAGCCCCCGA TCCGTCCGCC TCGAAGATCG CCACGGTGCT GCGCGTCACG 
AGCGGCAACT TCCTGGAGAT GTTCGACTTC TTCCTGTTCG GGTTCTACGC CAGCTACATC
TCCAAGGCGT TCTTCCCGGC CGGGAACGAG GTCGCCTCCC TGCTGCTGAC CTTCGTGACC
TTCGGGGCCG GCTTCCTGAT GCGCCCGCTC GGGGCCGTCT TCCTGGGCGC CTACGTGGAC
CGGGTCGGGC GGAGGAGGGG CCTCATCGTC ACGCTCGGCA TCATGGCGAT GGGCACGATC
CTGATCGCCT TCGTGCCCGC CTACGAGACG ATCGGCCTCG CGGCGCCCCT CCTGGTCCTG
ATCGGGCGGC TGCTGCAGGG CTTCTCGGCG GGCGTCGAAC TCGGCGGCGT CTCGGTCTAC
CTCTCGGAGA TGGCGACGCC GGGCCGCAAG GGCTTCTACG TGGCGTGGCA ATCGGCGAGC
CAGCAGGTCG CCATCATGGT GGCGGCGCTG ATCGGCTACG CCCTCAACCT CGCGCTGCTG
CCGCCGCAGA TGCAGGATTG GGGCTGGCGG GTGCCGTTCT TCATCGGCTG CCTGATCGTG
CCGTTCCTGT TCTACGTCCG CCGCTCGCTG GAGGAGACCC AGGAATTCCT GCAGCGGCGC
CACCGGCCGA GCGGCCGCGA GATCGCGCGC TCGCTCGGGC AGAACTGGCG CATCGTGCTG
CTCGGCATGC TCCTCGTCGC GATGACGACG ATCTCCTTCT ACACGATCAC GGTCTACACC
CCGACCTTCG GCAAGGACGT GCTGAAGCTC TCGGCGACCG ACAGCCTCGT CGTCACCTTC
TGCGTCGCGG TCTCGAACTT CGTTTGGCTG CCGGTGATGG GCGCGCTCTG CGACCGGGTC
GGCCGCAAGC CCCTGCTGAT CGCCTTCTCG GGCCTCGCGG CGCTCACCGC CTACCCGGCG
CTGCTCTGGC TCGTCGGCCA CGTCTCGTTC CTCAACATGC TGATCGTGCT GCTGTGGCTG
TCCTTCCTGT ACGGCAGCTA CAACGGCGCC ATGGTGGTGG CGCTGACCGA GATCGTGCCG
GTGAGCGTGC GCACGGCCGG CTTCTCGCTC GCCTACTCGC TGGCCACCGC CCTGTTCGGC
GGCTTCACGC CCGCCGTCTC GACCTGGCTC ATCAAGGTCA CCGGCGACAA GGCGGCGCCG
GGCCTCTGGA TGGCGTTCGG CGGCCTCGCC GGACTGGTCG CGACGGTCCT GATCTACCGC
CGGGCCGGGA CGAGCGCCGC CCCGGGCGTG GTCCGGCCGG TCCCGGGTGA GTGA
 
Protein sequence
MAGPAPDPSA SKIATVLRVT SGNFLEMFDF FLFGFYASYI SKAFFPAGNE VASLLLTFVT 
FGAGFLMRPL GAVFLGAYVD RVGRRRGLIV TLGIMAMGTI LIAFVPAYET IGLAAPLLVL
IGRLLQGFSA GVELGGVSVY LSEMATPGRK GFYVAWQSAS QQVAIMVAAL IGYALNLALL
PPQMQDWGWR VPFFIGCLIV PFLFYVRRSL EETQEFLQRR HRPSGREIAR SLGQNWRIVL
LGMLLVAMTT ISFYTITVYT PTFGKDVLKL SATDSLVVTF CVAVSNFVWL PVMGALCDRV
GRKPLLIAFS GLAALTAYPA LLWLVGHVSF LNMLIVLLWL SFLYGSYNGA MVVALTEIVP
VSVRTAGFSL AYSLATALFG GFTPAVSTWL IKVTGDKAAP GLWMAFGGLA GLVATVLIYR
RAGTSAAPGV VRPVPGE