Gene M446_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2629 
Symbol 
ID6133978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2921227 
End bp2921937 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content76% 
IMG OID641642843 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001769502 
Protein GI170740847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.168937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CCCTGACGCC CCGCGACCGG CTGATCGTCG CCCTCGACAT GGCGAGCCGC 
GACGAGGCCG AGCGCCTGAT CGACCGCATC GGCGACGCCG CCGCCTTCTA CAAGATCGGC
TACCGGCTCG GCTACGCGGG CGGGCTCGCC CTGGCCGAGC GGCTCGCCGC CTCCGGCGTC
AAGGTCTTCC TGGACCTGAA GCTCCACGAC ATCGGCAACA CCGTCGAGGA GGGCGTGCAG
TCGCTGGCGC GCCTCGGCGC CCACCTGCTC ACCGTCCACG CCTACCCGCA GACGATGCGG
GCGGCGCGGC GCGGGAGGGA CTCGGTGCCC GGGAGCGCGC TCAGGCTCCT CGCCGTCACG
GTGCTCACCT CCTACGACGA TGCCGACCTG CGCGAGGCCG GCTACGCCGG CGGCGTAGCC
GACCTCGTGG CGTCCCGCGC GGCCGCCGCC CGCGACATCG GCATCGACGG GATCGTCTGC
GCGGCGACCG AGGCCGCCGC CGTGCGGGCG GTGATCGGGC CGGACCGCCT GATCGTCACC
CCCGGCATCC GCCCGGCGGG CGCCGCGAGC GGCGACCAGA AGCGCGTCGT GACGCCGGCC
GCCGCCATCC GGGCCGGGGC CGACCACCTC GTGGTCGGCC GGCCGATCAC CGAGGCCGCC
GATCCGCGCG CGGCGGCGCG GAGCATCGTT TCCGAGATCG CCGAGGCGTG A
 
Protein sequence
MTEPLTPRDR LIVALDMASR DEAERLIDRI GDAAAFYKIG YRLGYAGGLA LAERLAASGV 
KVFLDLKLHD IGNTVEEGVQ SLARLGAHLL TVHAYPQTMR AARRGRDSVP GSALRLLAVT
VLTSYDDADL REAGYAGGVA DLVASRAAAA RDIGIDGIVC AATEAAAVRA VIGPDRLIVT
PGIRPAGAAS GDQKRVVTPA AAIRAGADHL VVGRPITEAA DPRAAARSIV SEIAEA