Gene M446_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2512 
Symbol 
ID6133248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2781887 
End bp2783632 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content71% 
IMG OID641642731 
Producttype I secretion system ATPase 
Protein accessionYP_001769396 
Protein GI170740741 
COG category[R] General function prediction only 
COG ID[COG4618] ABC-type protease/lipase transport system, ATPase and permease components 
TIGRFAM ID[TIGR01842] type I secretion system ABC transporter, PrtD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC GACCGCCGGA TCGTCATTCA GAACGCGATT GGAGTCTCAT CTCTGCTGTT 
GGCACAGGCC GCACAGCGCT GTTCGCTCTG GTCATGTTCA GCGCCTTGGC CAACGTTCTT
TACCTGACTG GCTCCTTCTA CATGCTGCAG GTCTACGACC GGGTGATCCC GAGCCGCAGC
ATCCCCACCC TGATCGCCCT CTCCGCCCTC GCCGCCACTC TCTACGCCGG ACAGGCTGCC
CTCGACTTCT TCCGCGGTCG CGTCCTCTCG CGCCTCGCCC GCTCCCTCGA CGAGCGCCTC
AGCCCGCGCG TTTTCGCCCT CGTCGCTCGC CTGCCGCTCT CAGCCGGCGG GGCCCCTCTC
GGCCTGCAGC CCCTGCGCGA CCTCGATCAG GTCAGAGGCT TCCTGGCCGG AGGCGGCCCG
ATCGGCTTCT TCGACCTCCC CTGGACGCCC TTCTACCTCG CCATCTGCTT CCTGTTTCAC
CCGCTGATCG GGCTCGCCGC CACGGTCGGC GCGCTCGTCC TGGTGCTCTT CACCGCCTGC
ACCGAGGTCC TCACCCGCAA GCCGGTCAAG GAGGCTGCCC AGCACGCCTC CGCTCGCATC
AATCTTGCCG AGGTGTGCCG CCGCAACGCC GAGGTCATCG CCGCGATGGG CATGAGCCCG
CGCCTCGGCG CGGGCTGGGA GGGGATCAAC CGCAAGCACC TCGACAGCCA CGAGCGCGCC
GGCGATGTGG CGGGTGGTCT CGGGGGCGTG TCCAAGGTCG CCCGCATGAT GCTGCAGTCG
GGCGTGCTCG GGTTGGGTGC CTACCTCGTC ATCCACGGCG AGGCGAGCGC GGGTATCATC
ATCGCTGGCT CCATCCTCTC CGCCCGGGCG CTCGCCCCGC TGGAGCAGGT GATCGCGCAC
TGGAAGAGCT TCGCGGCCGC TCGCCAGAGC TGGCGGCGGC TGCGCGCGCT GCTGGCCGCT
CATCCGGAGC CGGCCGACAG ACTCGCCCTG CGCAGGCCAG CAGCCAGCCT CTCGGTCGAG
GGCGTCGGCC TCGCGCCGCC CGGGGCTGCA TCGCTCGTCG TGACCGGCGT CTCGTTCGCG
CTCACGGCCG GCAGCGGGCT GGGCATCATC GGCCCGAGCG CGTCCGGCAA GTCGTCGCTC
GCCCGCGGCC TCGTCGGCGT CTGGCGGCCG GTGCGGGGCA GCGTGCGGCT GGACGGGGCC
AGCCTCGACC AGTGGACGCC CGAGATGCTG GGCCCCCACA TCGGCTACCT GCCGCAAGAC
ATCGAGCTCT TCGAGGGCAG CATCGGCCAG AACATCGCCC GCTTCGACCC CGGTGCGAAC
CCCGAGGCGA TCATCCGGGC AGCGGAGCAG GCCGGGGTGC ACGAGCTGAT CGTGCGGCTG
CCGCAGGGCT ACGAGACCCG CATCGGCGAG GGTGGGATGG CGCTCTCGGG CGGGCAGCGC
CAGCGCATCG GCTTGGCCCG CGCCCTCTAC GGCGAGCCGT TCCTGGTGGT GCTCGACGAG
CCGAACTCCA ACCTCGACGG CGAGGGCGAG CAGGCGCTCA CGCGGGCCAT CGCCGGGGTG
CGCGAGCGGG GCGGCATCGT GATCGTCATC GCGCATCGGC CGAGCGCGCT CGCGGCCCTC
GACCATGTGC TGGTGATGTC CCAGGGCCAG GCCCAGGCCT TCGGACCCAG GGAGCAGATC
ATGCGGCCGA TCAGGCCTGC CAGCGCGCCC GCGTTCATCC AGCCCGCGGC AGCAGGAGCC
GTCTGA
 
Protein sequence
MAVRPPDRHS ERDWSLISAV GTGRTALFAL VMFSALANVL YLTGSFYMLQ VYDRVIPSRS 
IPTLIALSAL AATLYAGQAA LDFFRGRVLS RLARSLDERL SPRVFALVAR LPLSAGGAPL
GLQPLRDLDQ VRGFLAGGGP IGFFDLPWTP FYLAICFLFH PLIGLAATVG ALVLVLFTAC
TEVLTRKPVK EAAQHASARI NLAEVCRRNA EVIAAMGMSP RLGAGWEGIN RKHLDSHERA
GDVAGGLGGV SKVARMMLQS GVLGLGAYLV IHGEASAGII IAGSILSARA LAPLEQVIAH
WKSFAAARQS WRRLRALLAA HPEPADRLAL RRPAASLSVE GVGLAPPGAA SLVVTGVSFA
LTAGSGLGII GPSASGKSSL ARGLVGVWRP VRGSVRLDGA SLDQWTPEML GPHIGYLPQD
IELFEGSIGQ NIARFDPGAN PEAIIRAAEQ AGVHELIVRL PQGYETRIGE GGMALSGGQR
QRIGLARALY GEPFLVVLDE PNSNLDGEGE QALTRAIAGV RERGGIVIVI AHRPSALAAL
DHVLVMSQGQ AQAFGPREQI MRPIRPASAP AFIQPAAAGA V