| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2507 |
|---|
| Symbol | |
|---|
| ID | 6132974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 2775465 |
|---|
| End bp | 2776685 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641642726 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001769393 |
|---|
| Protein GI | 170740738 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.050152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCTC CCCAGACTCC GAATTCCTTC CGCACCGGCC CCGACGAGCG CGGCCGCTTC
GGCATCTTCG GCGGCCGCTT CGTGGCCGAG ACGCTGATGC CCAACATCCT CGAACTGGAG
CGGGCCTACG CGGAAGCCAA GGCCGACCCG GCCTTCCAGG GCGAGATGAA CGCCTACCTC
ACCCACTACG TCGGCCGGCC GAGCCCGCTC TACTTCGCCG AGCGGCTCTC CGCGCATTTC
GGCGGCGCCA AGATCTACTT CAAGCGCGAG GAGCTGAACC ACACCGGCTC GCACAAGGTG
AACAACGTGC TGGGCCAGAT CCTGCTCGCC CGGCGCATGG GCAAGCCGCG CATCATCGCC
GAGACCGGGG CCGGCCAGCA CGGGGTGGCG ACGGCCACGC TCTGCGCCCG CTTCGGCCTG
AAATGCGTCG TCTACATGGG CGCGGTCGAC GTGGAGCGGC AGAAGCCGAA CGTCTTCCGC
ATGAAGATGC TGGGCGCCGA GGTGGTGCCG GTGCAGTCGG GCACCCGCAC CCTCAAGGAC
GCGATGAACG AGGCCCTGCG CGACTGGGTG ACGAACGTCG CCGACACCTT CTACTGCATC
GGTACGGTGG CGGGCCCGCA CCCCTATCCG GCGATGGTGC GGGATTTCCA GTCGGTGATC
GGCCGCGAGA CGCGCGAGCA GATGCTGGCC CAGGAGGGGC GGCTGCCTGA TTCCCTGGTC
GCCTGCATCG GCGGCGGCTC GAACGCGATG GGCCTGTTCC ACCCCTTCCT GGACGACCGC
GAGATCGAGA TCTACGGGGT CGAGGCGGCG GGCCACGGCG TCTCCTCGGG GCTGCACGCG
GCCTCGCTGA CCGGCGGCAA GCCCGGCGTG CTGCACGGCA ACCGCACCTA CCTGCTGATG
AATGAGGACG GCCAGATCGC GGACGCGCAC TCGATCTCGG CCGGCCTCGA CTATCCGGGC
ATCGGCCCGG AGCACGCGTG GCTGCACGAG GTCGGCCGGG TGACCTACCT GTCGGCGACC
GACAGCGAGA CGCTGGAGGC CTTCCGGCTG TGCTCCCTGA TGGAGGGCAT CATCCCGGCC
CTGGAGCCGG CCCACGCCCT CGCCAAGGTG GCCGAACTCG CGCCGACGAA GCCGCGCGAC
CACCTGATGG TGGTCAACCT CTCGGGCCGG GGCGACAAGG ACATCCCGCA GGTGGCCGAG
ATCCTCGGCG ACGCCCTCTG A
|
|---|
| Protein sequence | MNAPQTPNSF RTGPDERGRF GIFGGRFVAE TLMPNILELE RAYAEAKADP AFQGEMNAYL
THYVGRPSPL YFAERLSAHF GGAKIYFKRE ELNHTGSHKV NNVLGQILLA RRMGKPRIIA
ETGAGQHGVA TATLCARFGL KCVVYMGAVD VERQKPNVFR MKMLGAEVVP VQSGTRTLKD
AMNEALRDWV TNVADTFYCI GTVAGPHPYP AMVRDFQSVI GRETREQMLA QEGRLPDSLV
ACIGGGSNAM GLFHPFLDDR EIEIYGVEAA GHGVSSGLHA ASLTGGKPGV LHGNRTYLLM
NEDGQIADAH SISAGLDYPG IGPEHAWLHE VGRVTYLSAT DSETLEAFRL CSLMEGIIPA
LEPAHALAKV AELAPTKPRD HLMVVNLSGR GDKDIPQVAE ILGDAL
|
|---|
| |