| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2339 |
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| Symbol | |
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| ID | 6135671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 2603577 |
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| End bp | 2606456 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641642564 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001769232 |
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| Protein GI | 170740577 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00277698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.215878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCCACG CCACCCTCGC CCTCGCCCTC CTGGTCGCCC TCGCGGGCGC GCTGCACCCC
TCGGCGGCCC GCGCGCTGGA GGCGGTGCGG GTCAGCCTCG ACGCCCAGGC CATCGACCTG
ACGCCCGCGA TCGAGCGCTA CCGCTCGGAC GGCGACCTGA TCCAGATCTC GACCGCGCCC
GGCAAGGACG GCATCGTGCG CCGCATCGCC GTCAAGGCGC GCGAGACCGG GGCGCGGCCG
GACTGGATCG TGTTCGCGCT CACCAACGAC ACCGACGAGC AGATCGACCG CATCCTGGTG
GCGCCGCATT TCCGGCTCGT CGGGTCGGGG ATCGTCTGGC CGGATCTCGG CGGGTCGCGC
ATCGCCGCCA TCACGGCGAG CCAGGGCATC CGGCCCGAGC GCGACGAGAG CCCGGACGCG
GACCAGTTCA CCGTCACCCT CGACCCGGGC ACCACCGTCA CCTTCGTGGC GGAGCTGCGC
ACGCCCAACG TGCCGCAGAT CTACCTCTGG GACCAGGACG CCTACCGCAA GAAGGCGACC
GGGCTCACCC TCTACAAGGG CATCATCATC GGCATCGCCG GCCTGCTCGC CCTCTTCCTG
ACCGTCGTCT TCGTGGTGAA GGGCGCCATC ATCTTCCCGG CGGCGGCGGC CCTCGCCTGG
TCGGTCCTGG CCTATACCTG CATCGATTTC GGTTTCTTCC AGCGCATCTT CCCCGTCACG
GAGGCGGCCG AGCGGATCTA CCGCGCCTCC GCCGAGGCGG TGCTGGGGGC GACCCTGCTC
GTGTTCCTGT TCGCCTATCT CAACCTCGCC CGCTGGCACG TGCGCTACAG CCACGTGGCC
CTGCTCTGGC TGATCTTCCT CGCCGGCCTC GTCGCCCTCG CGGTGGTCGA TCCGCCGGTG
GCGGCGGGCG TCGCGCGCAT CTCGATCGCG ACCGTGGCCG GGGTCGGCCT CCTCCTCGTC
CTCTACCTCG CGGCCCATAA CGGCTACGAC CGGGCGATCC TGCTGATCCC GACCTGGCTC
CTCCTCACCG CCTGGGTGGT GGCGGCGGGC TTCGCCATCA CCGGCCAGCT GCGCAACGAC
CTCGTGCAGC CGGCGCTGAT CGGCGGCCTC GTGCTGATCG TCATGCTGAT CGGCTTCACG
GTGCTGCAGC ACGCCTTCGC GGGCGGGGGC ATCGGCGCGA CCCTGGTCTC GGACACCGAG
CGGCGGGCGC TCGCGCTCAC CGGCGCGGGC GACGTCGTGT TCGACTGGGA CGTGCCGGGG
GACCGGGTCT TCGTCGGGCC GGAGATCGAG GGGCAGCTCG GCCTCAAGCG CGGCGCCCTG
GAAGGGCCGG CGGCGAACTG GCTCGCCCTG CTGCACCCTT TCGACGTCGA CCGCTACTCG
GCCGCCCTCG ACACCGTCAT CGAGGAGCGG CGCGGGCGCA TCAGCCAGGA TTTCCGCCTG
CGCGCCGCCG CGGGTCCGTA TTTCTGGTTC CGCCTCAAGG CTCGCCCGGT GATCGGGGCG
GATGGCGAGG TGATCCGCAT CGTCGGCACC ATCGCGGACG TGACGGAGCT CAAGATCGCC
GAGGAGCGGC TGCTGCACGA CGCGGTCCAC GACAACCTCA CGGGCCTGCC GAACCGCGAG
CTCTTCCACG ACCGGCTCGA CGCCGCCCTG ACCCTGGCGG GCCAGGATCC CCGGCTGAAG
CCCACCGTCT TCGTCCTCGA CATCGACCGC TTCAAGCAGG TGAACGACGC GATCGGGCTC
TCGGCCGGCG ACTCGATCCT GCTCACCCTG TCTCGGCGCC TCGGCCGGCT GCTGCGGCCG
CAGGACACGC TCGCCCGCAT CGCCGGCGAC GAATTCGCCA TCATCCTGGT CTCGGAGCGC
GACCCGGACC GGATCATCGC CTTCGCGGAA TCGATCCGGC GGACCATCAC GACGCCGATC
ACCTACGCGG ACCGGGAGAT CTTCCTGACG CCCTCGATCG GCGTCGCGCT GCACGAGACG
GGCGCGAACG CCAAGCGCGA TCAGGTCTTC AAGAACGCCG AGATCGCCAT GATCCAGGCC
AAGCGCCAGG GCGGCGACCG GATCGAGGTC TACCGGCCGA CCATGCGGGC GGACCGGGGC
GACCGGATGC TGCTGGAGAA CGACCTCCGT CGGGCGCTGG AGCGCAACGA GATCAAGGTG
CTGTTCCAGC CGATCGTGCG GCTGGAGGAC CGCACCGTCG CGGGATTCGA GGCGCTGCTG
CGCTGGGACC ACCCCAAGCA CGGGCGGATC TCGCCCCAGA CCTTCATCCC GATCGCCGAG
GAATCCGGGC TCATCGTCGA TCTCGGCGTC TTCGCCCTGG AGCGCACGGC GGCCGAACTG
GCGGCCTGGC AGCAGGCGCT GGTCGTCGAG CCGCCGCTCT TCGCCTCGGT CAACGTCTCC
TCGCGCCAGC TCCTGCGCCA CGACCTGCTG CACGACGTCA AGACAGTGCT CGCCCGCACC
GGCGTCGCCC CGGGATCGCT GAAGCTCGAA CTCACCGAGA GCCTGGTGAT GGAGAACCCG
GAATACGCCG CCCAGATGCT CGCGCGCATC GCCGAGCTCG GGGCCGGGCT GTCGCTCGAC
GATTTCGGCA CCGGCTACTC GGCCCTGGCC TACCTGCAGC GCTTCCCGTT CGACACGCTC
AAGATCGACC AATCCTTCGT GCGCCAGATG GCGAGCGGCC GGACCGTGAT CCTGCGCTCG
ATCGTCCGCA TGGCGCAGGA ACTCGGGCTC GAGATCGTCG CGGAGGGGGC CGAGACCGAG
GCCGACGCGC AGGCCCTGGC CGAACTCGGC TGCGACTACG CGCAGGGCTT CGCGTTCGGC
GAGCCGATGT CGATCCACCA GGCGCGCCAG CTCGTCGGCG CGGCGCCCGC GGCGGCCTGA
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| Protein sequence | MRHATLALAL LVALAGALHP SAARALEAVR VSLDAQAIDL TPAIERYRSD GDLIQISTAP
GKDGIVRRIA VKARETGARP DWIVFALTND TDEQIDRILV APHFRLVGSG IVWPDLGGSR
IAAITASQGI RPERDESPDA DQFTVTLDPG TTVTFVAELR TPNVPQIYLW DQDAYRKKAT
GLTLYKGIII GIAGLLALFL TVVFVVKGAI IFPAAAALAW SVLAYTCIDF GFFQRIFPVT
EAAERIYRAS AEAVLGATLL VFLFAYLNLA RWHVRYSHVA LLWLIFLAGL VALAVVDPPV
AAGVARISIA TVAGVGLLLV LYLAAHNGYD RAILLIPTWL LLTAWVVAAG FAITGQLRND
LVQPALIGGL VLIVMLIGFT VLQHAFAGGG IGATLVSDTE RRALALTGAG DVVFDWDVPG
DRVFVGPEIE GQLGLKRGAL EGPAANWLAL LHPFDVDRYS AALDTVIEER RGRISQDFRL
RAAAGPYFWF RLKARPVIGA DGEVIRIVGT IADVTELKIA EERLLHDAVH DNLTGLPNRE
LFHDRLDAAL TLAGQDPRLK PTVFVLDIDR FKQVNDAIGL SAGDSILLTL SRRLGRLLRP
QDTLARIAGD EFAIILVSER DPDRIIAFAE SIRRTITTPI TYADREIFLT PSIGVALHET
GANAKRDQVF KNAEIAMIQA KRQGGDRIEV YRPTMRADRG DRMLLENDLR RALERNEIKV
LFQPIVRLED RTVAGFEALL RWDHPKHGRI SPQTFIPIAE ESGLIVDLGV FALERTAAEL
AAWQQALVVE PPLFASVNVS SRQLLRHDLL HDVKTVLART GVAPGSLKLE LTESLVMENP
EYAAQMLARI AELGAGLSLD DFGTGYSALA YLQRFPFDTL KIDQSFVRQM ASGRTVILRS
IVRMAQELGL EIVAEGAETE ADAQALAELG CDYAQGFAFG EPMSIHQARQ LVGAAPAAA
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