Gene M446_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2170 
Symbol 
ID6132298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp2419956 
End bp2420561 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID641642398 
Productshikimate kinase 
Protein accessionYP_001769066 
Protein GI170740411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.987325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0949629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGC CATCCTCCCC GGACGAGACG ATCGAGGCCC GCGTGCGCCG CGGGCTCGGG 
CAGCGCTCGA TCGTCCTCGT CGGATTGATG GGAGCCGGCA AGAGCACGGT CGGCCGGCGG 
CTGGCCGGGC GGCTCGGCAT GATCTTCATG GACGCCGACC ACGAGATCGA GGCGGCGGCG 
GGCCTCACCA TCGCGGACAT CTTCGCGATC TACGGCGAGA CGAGCTTCCG CGACGGCGAG 
GAGCGGGTGA TCGCGCGCCT GCTGCGCGAC GGGCCGATGG TGCTGGCGAC CGGTGGCGGC 
GCCTTCATGC GCCCCGAGAC GCGCCGCCGC ATCGCGGAGG CCGGCGTCTC GGTCTGGCTG 
AAGGCGGAAC TCGACGTGCT GATGCGGCGG GTGCGCAAGC GGCCGGGCCG GCCTCTCCTG 
CAGAACGAGG ATCCCGAAGG AACCATGCGC CGCCTCATGG ACCTCCGCCA CCCCGTCTAC 
GGCAGCGCCG ACGTGGTGGT GCTGTCCCGG GACGTCTCGC ACGACCGGGT GGTGCAGGAC 
GTGCTCGAAG CCCTCGACAC CCATTTCCAG GGCGATCCCT CGCTCCGGAG CGTCGCCGCC 
CAATGA
 
Protein sequence
MIEPSSPDET IEARVRRGLG QRSIVLVGLM GAGKSTVGRR LAGRLGMIFM DADHEIEAAA 
GLTIADIFAI YGETSFRDGE ERVIARLLRD GPMVLATGGG AFMRPETRRR IAEAGVSVWL 
KAELDVLMRR VRKRPGRPLL QNEDPEGTMR RLMDLRHPVY GSADVVVLSR DVSHDRVVQD 
VLEALDTHFQ GDPSLRSVAA Q