Gene M446_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2168 
Symbol 
ID6132296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2417411 
End bp2418811 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content70% 
IMG OID641642396 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001769064 
Protein GI170740409 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.20068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ATCTCGTCGT CATCGGCACC GGCCCCGGCG GCTACGTCTG CGCCCTCCGC 
GCGGCGCAGC TCGGCCTCAA GACCGCCGTG GTGGAGAAGC GGGCGGCCCA CGGCGGCACC
TGCCTGAACG TCGGCTGCAT CCCGTCCAAG GCGCTGCTCC ACGCCTCCGA GGCCTTCGAG
GAGACGACGA AGCACCTGCC GGTGCTCGGC ATCACGGTCG GCCAGCCGCA GCTCGACCTC
GCCCGGATGA TGGCCTTCAA GCAGGAGGGC GTGGACGGCA ACACCAAGGG CGTCGCCTAC
CTGCTCAAGA AGAACGGGGT CGAGAGCTTC CAGGGCGTCG GGCGCCTCGC CGGGGCGGGC
CGGGTCGAGG TGCGCTCCGA GGACGGCGGC AACCACCTGC TGGAGACCCG GAACATCGTC
ATCGCCACCG GCTCGGACGT GGCGAACCTG CCGGGCGTGA CCATCGACGA GGAGGTGGTG
GTCTCCTCGA CGGGCGCCCT CGACCTCAAG GCGGTGCCGG AGAGGCTCCT GATCATCGGG
GCGGGCGTGA TCGGCCTCGA ACTCGGCTCG GTCTGGCGCC GCCTCGGCTC GCAGGTGACG
GTGGTCGAGT ATCTCGACCG CATCCTGCCC GGCATGGACG GGGAGGTCGG CAAGCAGTTC
CAGCGCATCC TGGAGAAGCA GGGCGTGACG TTCCGCCTCT CCTCGAAGGT GACCGGGGTC
GAGCGCACCA ACGCGGGCGC CAAGGTCACG GTGGAGCCGG CGGCCGGCGG CGCGGCCGAG
GCCCTGGAGG CCGACGTGGT CCTGGTGGCG ATCGGCCGCG TGCCCTACAC GGCCGGCCTC
GGCCTCGACA CGGTCGGCGT GCAGGTCGAC AACAAGGGCC GCATCCTCAC CGACAACCAC
TACGCCACGA ACGTCACCGG CATCTACGCG ATCGGCGACG TGATCGCCGG GCCGATGCTG
GCCCACAAGG CGGAGGACGA GGGCGTCGCG GTGGCGGAGA TCCTCGCCGG CAAGGCGGGC
CACGTGAATT ACGGCGTGAT CCCGAACGTG GTCTACACCA CGCCGGAGGT CGCCTCGGTC
GGCAAGTCCG AGGAGGAGCT CAAGACGGAC GGGATCGCCT ACAAGACCGG CAAGTTCCCC
TTCACGGCCA ACGGCCGCGC CAAGGTCAAC CACACCACGG ACGGGTTCGT GAAGGTGCTG
GCCGACGCCA AGACCGACCG GGTCCTCGGC GTGCACATCG TCGGGCCGGA GGCGGGCAAC
CTGATCATGG AGGTGGCCGT GGCGATGGAG TTCGGCGCCT CCTCGGAGGA CATCGCCCGC
ACCTGCCACG CGCACCCGAC CCTCACCGAG GCGGTGAAGG AGGCGGCCCT CGCCGTGGAG
AAGCGCGCCC TGCACATGTG A
 
Protein sequence
MSYDLVVIGT GPGGYVCALR AAQLGLKTAV VEKRAAHGGT CLNVGCIPSK ALLHASEAFE 
ETTKHLPVLG ITVGQPQLDL ARMMAFKQEG VDGNTKGVAY LLKKNGVESF QGVGRLAGAG
RVEVRSEDGG NHLLETRNIV IATGSDVANL PGVTIDEEVV VSSTGALDLK AVPERLLIIG
AGVIGLELGS VWRRLGSQVT VVEYLDRILP GMDGEVGKQF QRILEKQGVT FRLSSKVTGV
ERTNAGAKVT VEPAAGGAAE ALEADVVLVA IGRVPYTAGL GLDTVGVQVD NKGRILTDNH
YATNVTGIYA IGDVIAGPML AHKAEDEGVA VAEILAGKAG HVNYGVIPNV VYTTPEVASV
GKSEEELKTD GIAYKTGKFP FTANGRAKVN HTTDGFVKVL ADAKTDRVLG VHIVGPEAGN
LIMEVAVAME FGASSEDIAR TCHAHPTLTE AVKEAALAVE KRALHM