Gene M446_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2100 
Symbol 
ID6134882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp2351997 
End bp2352629 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID641642328 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001768996 
Protein GI170740341 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00869837 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCACATG AAAGGGACGA TGCCGTGGCC GCGTTAACGA ACGGTGATTT CACCGAGCGC 
ACGGATCCCT GGGCGCTGTT CACCGAGTGG TTCGAGCAGG CGCAGGGGTC CGAGCCGGAG 
GATCCCAACG CCATGACGCT CGCCACGGCC GGCCGCGACG GGCTGCCGGA TGCGCGCATC 
GTCCTGCTGA AGGGCTTGGA CGCGCAGGGC TTCGTCTTCT ACACCAATTC CCGCTCCGCC 
AAGGGGCTCG AACTCGCCGA GAACCCGCAG GCGGCGCTGC TGTTCCACTG GAAGAGCCTG 
CGCCGGCAGG TGCGGGTGCG GGGCGCCGTG GGGCGCGTCG AGGATGCGGA GGCCGACGCC 
TACTTCGCCA CGCGGCCCCG CGACAGCCGG ATCGGCGCCT GGGCGAGCCG GCAATCCGAG 
CCCCTGGAGA GCCGGGGCGC CCTGGAGCGG GCCGTGGCGG AGGCCGCCGC GCGCTTCGGC 
GAGGACGAGG TGCCCCGGCC GCCCCACTGG ACCGGCTTCC GGGTGACGCC CGTCACGATC 
GAGTTCTGGC AGAACGGCGA CTTCCGGCTG CACGACCGCG TCCGCTTCAC CCGGGCCGGC 
GAGGGCTGGG AGCGCAGCCG GCTCTTCCCG TGA
 
Protein sequence
MSHERDDAVA ALTNGDFTER TDPWALFTEW FEQAQGSEPE DPNAMTLATA GRDGLPDARI 
VLLKGLDAQG FVFYTNSRSA KGLELAENPQ AALLFHWKSL RRQVRVRGAV GRVEDAEADA 
YFATRPRDSR IGAWASRQSE PLESRGALER AVAEAAARFG EDEVPRPPHW TGFRVTPVTI 
EFWQNGDFRL HDRVRFTRAG EGWERSRLFP