Gene M446_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2094 
Symbol 
ID6134775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2344865 
End bp2345998 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID641642323 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001768991 
Protein GI170740336 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0888739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0111779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGC TTCTCGTCGG GGGCGGCGGC GCCTACGCGT GGCAGCGCAA CCAGGCCGCC 
GCGCCGGCGC CGCGCGCCGC GCGGGCGCCC GCCCCGGTCC CGGTGCTCCT CGCGAGGGTG
GAGCAGGGCC CCTTCAACGT GGTGCTCGGC GGGCTCGGCA CCGTCCAGGC CTACAACACC
GTCCAGGTGC GCAGCCGCGT GGACGGCGAG ATCCAGAAGG TGGCGTTCCG GGAGGGGCAG
GTCGTGCGCA AGGGCGACCT GCTCGTCCAG GTCGATCCGC GTCCCTTCCA GGCGACCCTG
GACCAGGCGC GGGCGAAGAA GACCCAGGAC GAGGCCAACC TGCGCAACGC CAGGGCGGAC
CTGGAGCGCT ACACCAAGCT CGGCGAGTAC GCCTCCCGCC AGCAGACCGA GACCCAGGGC
GCGACGGTGG CCCAGCTCAC CGCCCAGGTC GCCTCCGATC AGGCGGCGAT CGACAACGCC
GAGACCCAGC TCGGCTACGC CACGATCCGC GCCCCCCTGG ACGGCGTCAC GGGGTTCCGG
CAGGTCGACG TCGGCAACAT CGTCAACGCC TCGACCCAGA CCGGCATTGT CACCATCACG
CAGGTCGAGC CGATCTACGT CGTCTTCACG GCGCCCGAGG AGGAGCTGCA GCAGATCGCC
GAGGCCCACG CGGCCGGCCC GGTGCCGGTC GAGGCGTGGT CCACCGACGG CCAGCGGAAG
CTCTCGGACG GCACGCTGAG CGTGATCAAC AACCAAGTCG ACACGGCGAC CGGCACGATC
CGCCTGAAGG CGAGCTTCCC CAACCGGAAC CACGCGCTCT GGCCGGGCCT TTCGGTCTCG
ACGCGCATGC GCATCGGGGT CGAGAAGGAG GCCGTGACCG TGCCGGAGGA CGCCGTGCAG
CACGGGCCGA AGGGCCTCTA CGCCTTCGTG GTCGGCGAGG ACGGCAAGGC GCGGGTGCAG
CCGATCACGG CCGGGCATTC CAGCGAGGGC CGCACCGTCA TCCGCCAGGG GCTCACCCCG
GGGCAGAGCG TCGTCAAGGA GGGTCAGTCC CGCGTGCAGG ACGGCGGCCC CGTGGCCGAG
CGCCGGCCCA CCGGGACGGC CCAGGCGCAG GCCCCCGCGA CCGGAGCGCC CTGA
 
Protein sequence
MLLLLVGGGG AYAWQRNQAA APAPRAARAP APVPVLLARV EQGPFNVVLG GLGTVQAYNT 
VQVRSRVDGE IQKVAFREGQ VVRKGDLLVQ VDPRPFQATL DQARAKKTQD EANLRNARAD
LERYTKLGEY ASRQQTETQG ATVAQLTAQV ASDQAAIDNA ETQLGYATIR APLDGVTGFR
QVDVGNIVNA STQTGIVTIT QVEPIYVVFT APEEELQQIA EAHAAGPVPV EAWSTDGQRK
LSDGTLSVIN NQVDTATGTI RLKASFPNRN HALWPGLSVS TRMRIGVEKE AVTVPEDAVQ
HGPKGLYAFV VGEDGKARVQ PITAGHSSEG RTVIRQGLTP GQSVVKEGQS RVQDGGPVAE
RRPTGTAQAQ APATGAP