Gene M446_2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2031 
Symbol 
ID6135590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2266555 
End bp2267031 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content80% 
IMG OID641642261 
Productputative general secretion pathway protein H precursor 
Protein accessionYP_001768929 
Protein GI170740274 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00566537 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0245477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC CCCGCCCGCC CGGCCGCGGA CCCGCGCGGG AGAGAGCCGG CGGCTTCGTG 
CTGCTCGAAC TCGCGCTGGC GCTCCTGATC CTGGCGCTGC TCGCCGCGCT CGCCCTGCCC
CGCGCGCGGC CGTTCGACGG GCCGGCCCGC CTCGGGCTGA AGGCGCAGGA GATCGCCGCG
CTGCTGCGGC GCGACCGGGA CGCGGCCCTG CGCGGGCAGA CGACGATCCG CACCGAGATC
GACCTCGCGC GCCGCGCGGT GCGCTCGGGC GCGGCGAACG GCGAGGTGCC GGTGCCGACC
GCCTACGCCA TGCGCGTCGC GGCCCGCGAG ACAGCGATCC GCTTCCGGCC GGACGGCAGC
GCCTCCGGCG GCACGGTCTT CCTCGCCGGG CCCGGCGGGG GCAGCCTCGC GGCCGTGGAG
GTGGACGACC TCACGGGCGC CGTCACGGTG ACGCGGGAGG GCCGCCATGG CCGCTGA
 
Protein sequence
MPAPRPPGRG PARERAGGFV LLELALALLI LALLAALALP RARPFDGPAR LGLKAQEIAA 
LLRRDRDAAL RGQTTIRTEI DLARRAVRSG AANGEVPVPT AYAMRVAARE TAIRFRPDGS
ASGGTVFLAG PGGGSLAAVE VDDLTGAVTV TREGRHGR