| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2024 |
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| Symbol | |
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| ID | 6129491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 2258142 |
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| End bp | 2260481 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641642254 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001768922 |
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| Protein GI | 170740267 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0993324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGCAG GGCTCCTGGG CTTCGTCGGG CCGCTGCGGT CGCAGGAAGC GGGCCGCGCG
ACGCTGGCCG GGCCGGAGCT CAACCTCGAC CTCACCGCCC GCGCGACCCC GCCGGTCGGC
GCGAAGGCGG GGCGGGAGGG CGGCCTCGTC CCGCGCGACC GCGCGCCGGG GCGCAGCTAC
CATTTCCCGC CGGAGCCGAT CGAGACGACG GGCGGCCTGC CGGTCGATCT CGGCGAGCCC
CTCGACGTCG GCAATGCGGC GACGGGCGAG GGCAGCTTCC GGCTCAACTT CGAGCGGGCC
GAGATCAAGG ACGTGCTGCA CACGGTCCTG AACGAGACGC TCGGCCTCAG CTACACGCTC
GGGGCGGACG TCGCCGGGCA GGTGACGATC TCCTCGCCGC GGCCCCTGAC CCGGGCCGAG
ATGCTGGGCG CGATCGAGAG CGTGCTGGCG AGCCACGGGC TGGCCCTGAC CCGCAACGGC
AGCGGCTACC TGATCGCCCC GACCGCCCTG GGCTCCGGCT CGGTGAATTT CGGCTCGGGC
GCGCAGGCGG GCTACGGCGT GTCGGTCGTG CCCCTGCGCC ACGTCTCGGC CGCGGTGATG
TCGCGCCTCG TCTCCGGCTT CGTCACCGAG GCGGACGGGG TCCGCTTCGA CATCTCCCGC
AACACCATCG TGCTGAAGGG CCCGGGCCCC AAGCGCCAGG AGGCGGTGAG CGCCATCCTG
TCCCTCGACG GCGACTGGAT GCGCGGCCAG TCGGTCAGCC TGTTCGAGCT GCGCCGCGTG
CGGCCCGAGG CCGTGGTGGC CGAACTCGCC CAGCTCTTCG ACACCTCGGA GAACGGCGCC
GGCTCGGGGC TGATCCAGTT CAAGCCGGTC TCGCGGCTGC GGGCGGTGCT GGTCCTGTCG
AAGAACCCGG CCCTGATCCG CCGTGCCGAG ACCTTCATCC GCAAGCTCGA CAACGTCACC
GAGGCGGCCG AGGAGAACGT CTTCGTCTAC AAGGCGCGCT ACCGGGACGC GCGGGAGCTC
GCCCGGGTCG TGAACGGCCT GTTCGGCAAC GGCCAGGGCG GCCTCGCGGC GGGGCCGACA
GGGCCGGGCC TCGGCCAGCA GGGCCGGTCT GGGCTCGGCG GCGCGGGATC GTCGGGCCAG
GGCGGGCTCG GCTCCGGCTT CGGCGGGGGC GGCCTGTCGA GCCCGGGCGG CTCCGGGCTG
CCGGCCTCGC AGCCGGGCGG CAACGGCAAC GAGCTCCTGC GGGCGCGCTT CGCCTCGGCC
TTCGGCGACG CGGTGCCGGC CGCCCCGGCG GATCCGGGCG GCGGCATGGG CGGGGGCATG
GGCGGGGGCA TGGGCGGCGG CTTGGCTGGC GGCGGCATGA ACAGCGCCAT GATCGACCTG
ACGACGCAGC CGAACGGGCG CGGGCGCGGC GTGGCGATCA GCGCCGACCC GGCCAACAAC
GCGGTCGTCA CCTACGCGGA CGGCGACACG TACAAGAAGG TCTACGCCGC CCTGCGCCGC
CTCGACGCGG TGCCGGCCCA GGTCGCCGTC AACGTCACCA TCGCGGAGGT GAAGCTCAAC
GACGAGCTCA AGCACGGCGT CCAGTTCTTC CTCGACAGCC GCAGCCTGGG GCTCGGCCGC
AACAAGGGCT CGGTCGGTCT GGTCAGCGCG GCGGCGAGCG GCGCCAGCAA CGTCCTCAAG
CCCGGCAACG GCTTCAACTT CCTGGTGGGC GGCTATTCCG GGCCGGACGT GGTGATCAAC
GCGCTCGACG GCTTCACGGA CGTGAAGGTG CTGTCCTCGC CCTCGCTCGT GGTGCTGGAG
AACCAGCCGG CGACGCTGCA GGTGGGCGAT TCGGTGCCGA TCACGACGCG TCAGGCCCAG
AGCGTGGACT TCGCCAACGC GCCGCTGATC AACCAGGTCG AGTTCCGCGA CACCGGCATC
ATCCTCAACG TGATCCCGCG CATCGGCCAG AACGACGCGG TGACGATGCA GATCGAGCAG
GAGATCTCCG CGGTGGTGGG CGGCTCCGAC ACGCTCACGC CGACGATCTC GAAGCGCCGG
GTGGCGAGCA CGATCTCGGT GGCGAACGGC CAGACGGTGC TGCTCGCCGG GCTGATCAGC
GACAAGCACC AGCGCGAGCG CGACGGCATC CCGATCCTCG GCCGGCTGCC GCAGATCGGC
GCCCTGTTCA GCTCGACCAA CAATGCCGAC GAGCGGACGG AGCTGGTCGT GTTCATCCGC
CCGGTGGTGG TGCGCAGCGG CCGCGACGCG CAGCGGGTGG CCGAGGATTA CCGCGGCCAG
CTCCTGGACG CGGGCGTGCG CCGCGGCGCC CGCGCGGCGG CCCCGGTGCT CAAGCGCTGA
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| Protein sequence | MIAGLLGFVG PLRSQEAGRA TLAGPELNLD LTARATPPVG AKAGREGGLV PRDRAPGRSY
HFPPEPIETT GGLPVDLGEP LDVGNAATGE GSFRLNFERA EIKDVLHTVL NETLGLSYTL
GADVAGQVTI SSPRPLTRAE MLGAIESVLA SHGLALTRNG SGYLIAPTAL GSGSVNFGSG
AQAGYGVSVV PLRHVSAAVM SRLVSGFVTE ADGVRFDISR NTIVLKGPGP KRQEAVSAIL
SLDGDWMRGQ SVSLFELRRV RPEAVVAELA QLFDTSENGA GSGLIQFKPV SRLRAVLVLS
KNPALIRRAE TFIRKLDNVT EAAEENVFVY KARYRDAREL ARVVNGLFGN GQGGLAAGPT
GPGLGQQGRS GLGGAGSSGQ GGLGSGFGGG GLSSPGGSGL PASQPGGNGN ELLRARFASA
FGDAVPAAPA DPGGGMGGGM GGGMGGGLAG GGMNSAMIDL TTQPNGRGRG VAISADPANN
AVVTYADGDT YKKVYAALRR LDAVPAQVAV NVTIAEVKLN DELKHGVQFF LDSRSLGLGR
NKGSVGLVSA AASGASNVLK PGNGFNFLVG GYSGPDVVIN ALDGFTDVKV LSSPSLVVLE
NQPATLQVGD SVPITTRQAQ SVDFANAPLI NQVEFRDTGI ILNVIPRIGQ NDAVTMQIEQ
EISAVVGGSD TLTPTISKRR VASTISVANG QTVLLAGLIS DKHQRERDGI PILGRLPQIG
ALFSSTNNAD ERTELVVFIR PVVVRSGRDA QRVAEDYRGQ LLDAGVRRGA RAAAPVLKR
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