Gene M446_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1928 
Symbol 
ID6134168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2153568 
End bp2154440 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content70% 
IMG OID641642163 
Productinner-membrane translocator 
Protein accessionYP_001768831 
Protein GI170740176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGC CCCAGATCCT GATCGAGGCG GCCCTCAACG GCCTGATGAC CGGGGCCGTC 
TACGCGCTGA TCGCGCTCGG ATTGACCTTG GTCTACGGGG TGCTGCACAT CATCAATTTC
GCGCACGGCG CCCTGCTGAC CTGCGCGATG TTCGCGGTGT GGGGCGCCTC CGCCACCGCG
CATGTCGATC CCTACCTGGC GCTGATCGCC GTGGTGCCGC TGATGTTCGG CCTCGGCTAC
GGGCTCCAGC GCCTCGTCAT CGGCCCGGCG AGTCACGGCA GCGACGACAA CGTGCTGCTC
GTCACCCTCG GTCTCTCGAT CGTGCTGGAG AACGCGCTGC TGGCGGCGTT CCGCTCCGAC
ACCCGGGCGA TCGAGTCCGA CGCGGCGCTC CAGGTGGTCG AGGTCGGGCC GCTGTTGCTC
TCGACCCCGC GGCTGATCGG CCTCGCCGGC TCGCTCGTGG TCACGGGCCT GCTCTGGCTG
CTCCTCAACC GCACCGACAC GGGCCGGGCG ATCCGGGCGG TCTCCCGCGA GAAGCTCGGG
GCCCGCCTCG TCGGCATCGA GGTCGACCAC GTCTACGCGG TCACCTTCGG CCTCGGCTGC
GCCTGCCTGG GCGTGGCGGC ATGCCTCCTG ATGCCGACCT ACTACGTCAA TCCGCGCTCG
GGCGCCGCCT TCGTGCTCGT CGCCTTCACC ATCGTTGTGC TCGGCGGCAT GGGCTCGATC
ACCGGCGCGC TGGTGGGCGG CCTGGTGATC GGGGTCGTCG AGAGCTTCTC CGGCCTCATC
CTCGGCGACA GCCTCGGGCA GATCGGCATC TTCCTGATCT TCATCCTGGT GCTGCTGGTG
CGGCCGACCG GCCTGTTCGG GGCGCGCGCA TGA
 
Protein sequence
MYAPQILIEA ALNGLMTGAV YALIALGLTL VYGVLHIINF AHGALLTCAM FAVWGASATA 
HVDPYLALIA VVPLMFGLGY GLQRLVIGPA SHGSDDNVLL VTLGLSIVLE NALLAAFRSD
TRAIESDAAL QVVEVGPLLL STPRLIGLAG SLVVTGLLWL LLNRTDTGRA IRAVSREKLG
ARLVGIEVDH VYAVTFGLGC ACLGVAACLL MPTYYVNPRS GAAFVLVAFT IVVLGGMGSI
TGALVGGLVI GVVESFSGLI LGDSLGQIGI FLIFILVLLV RPTGLFGARA