Gene M446_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1908 
Symbol 
ID6134310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2132561 
End bp2133583 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID641642147 
Productlytic transglycosylase catalytic 
Protein accessionYP_001768815 
Protein GI170740160 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGA AGCTTGCGCG CGTACTCCTG ACCGGCGTGA TCGGGGCGTC GCTGGCCGCC 
GCACCAGTGC GATCCGCTCC GAGTACGGCC ACGATGGAGA CGGTCGGGCA GGCGCTCTGC
CGTCTCATCG AGAGCTCCGC CAGAGCCAGA GGGCTGCCGG TGCCCTTTCT CACCCGCCTG
ATCTGGAGGG AGAGCGGCTT CCGGACCAGC GCCACTAGTT CAGCGGGCGC GCAGGGTGTG
GCCCAGTTCA TGCCCGGCAC CTCGCGCGAG CGCGGCCTCT CTGACCCCTT TGACCCGGAG
CAGGCCATCC CGCACGCGGC GCATCTCCTG GCCGATCTGC GCAAGCGGTT CGGCAACCTT
GGCCTTGCTG CCGCCGCCTA CAACGGCGGC CCAACCCGTG TGGCCAATTG GCTTGCTGGC
TCGGGCAGCC TCCCCGCCGA GACGCGGGCC TACGTCCACG CGGTCACGGG CAGAGCAGTG
GAGGAGTGGC GTGCCCCGGC AATGGCGAGA CCCGATACGC TCACCGGTGA GATATCTGGT
GCGACCTCTC CCGGGGACGC GGGCAACACT CGCGCGGTGG GCAAGGCAGC GGAGACTGGC
GGGGCGAAGC GCGCCGCCCC CTCAGCCGCT CTGGCGGCAG CCGGGCGGGG AGCGGAGACG
GGTCCGAGCT GCGCACAAGT CACCGCGGGG CTGCGTGTCC CGTCACGCCC CGAACGTGCC
TCGCCCCTTG CTCTTGAGCC CATTGTCGTC CCGCCAGCTC CGCCGCCGTG GGGACCCTGG
GGCGTTCAGC TGGCCGGCAA CTTCTCCAAG GAGCAGGCCC TCGAGAGCTT TGTGCGCACG
CGTTCCGCCT ATGCCAAGGT GATCGGGGAG GCTCGCCCGA TGATCATCGG GACGCGCCTG
CTGAGCCGGG GCGGCGGGGC GTTCTACCGG GTCCGCATTC CGGCCCAGAG CCAAGCGGAA
GCGACCGCAC TCTGCGGGAA GATCCGCACA GCCGGTGGTG CCTGCCTGGT CCTGAAAACC
TGA
 
Protein sequence
MIEKLARVLL TGVIGASLAA APVRSAPSTA TMETVGQALC RLIESSARAR GLPVPFLTRL 
IWRESGFRTS ATSSAGAQGV AQFMPGTSRE RGLSDPFDPE QAIPHAAHLL ADLRKRFGNL
GLAAAAYNGG PTRVANWLAG SGSLPAETRA YVHAVTGRAV EEWRAPAMAR PDTLTGEISG
ATSPGDAGNT RAVGKAAETG GAKRAAPSAA LAAAGRGAET GPSCAQVTAG LRVPSRPERA
SPLALEPIVV PPAPPPWGPW GVQLAGNFSK EQALESFVRT RSAYAKVIGE ARPMIIGTRL
LSRGGGAFYR VRIPAQSQAE ATALCGKIRT AGGACLVLKT