Gene M446_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1803 
Symbol 
ID6132382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2019837 
End bp2020625 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content76% 
IMG OID641642054 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001768723 
Protein GI170740068 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[I] Lipid transport and metabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.225984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CCGCCCGCAC CGCCCTCGTC ACCGGCGCCG CCCGCGGCAT CGGGCTCGCG 
ACGGCGCGGC TCTTCCTGCG CGACGGCTGG CGGGTGGCGC TCCTCGACAT CGACGCCGAG
GGCTTGGCCG CGGCCGCGTC GGGGCTCGAC GCGCCCGAGC GCGTCCTCGC CCTCACCTGC
GACGTCTCCG ACGAGGCCGG GGTCGAGCGG GCGGTGGCGG CCACGGCCGA CCGCTTCGGC
CGGCTCGACG CCCTGGTGAA CAATGCCGGG GTCGCGGTGT TCAAGCCGCT CCTCGACACG
AGCCCGGCCG AGTGGGCGCG CGTGCTCGCG GTGAACCTCA CCGGGCCGTT CCTCTGCGCC
CGGGCCGCCG CGCCGGTGAT GGCCCGCACG GGCGGCGGGG GGATCGTCAA CATCACGTCG
ATCTCGGGGC TGCGCGCCTC GACCCTGCGC GTCGCCTACG GAACCAGCAA GGCGGGGCTC
GCCCACCTGA CCAAGCAGCA GGCAGTCGAG CTCGCCGGGC TCGGCATCCG GGTCAACGCC
GTCGCCCCCG GCCCGGTCGA CACCGCCATG GCGAAGGCCG TGCACAGCCC GGCGATCCGC
GCCGACTACC ACGACGCGGT GCCGCTCAAC CGCTACGGGC TGGAGGAGGA GATCGCCGAG
GCGATCCTGT TCCTCGCCGG TCCGCGGGCC GCCTACGTGA CCGGCCAGAT CCTGGCGGTG
GATGGCGGGT TCGACGCCGC CGGGATCGGG CTGCCGACGC TCAGGCGGGC GGCGGGCGCG
CGGGAGTGA
 
Protein sequence
MTEPARTALV TGAARGIGLA TARLFLRDGW RVALLDIDAE GLAAAASGLD APERVLALTC 
DVSDEAGVER AVAATADRFG RLDALVNNAG VAVFKPLLDT SPAEWARVLA VNLTGPFLCA
RAAAPVMART GGGGIVNITS ISGLRASTLR VAYGTSKAGL AHLTKQQAVE LAGLGIRVNA
VAPGPVDTAM AKAVHSPAIR ADYHDAVPLN RYGLEEEIAE AILFLAGPRA AYVTGQILAV
DGGFDAAGIG LPTLRRAAGA RE