Gene M446_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1734 
Symbol 
ID6130356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1950038 
End bp1950865 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content74% 
IMG OID641641990 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001768659 
Protein GI170740004 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA GACTGGCGGA CAAGGTCGCG CTCGTCACGG GCGGCGCGCG GGGCATCGGG 
CTCGCGGTGG CGCGGGCCTT CGCGCGGGAG GGCGCCGCCC TCGTGATCGC CGACGTGAAC
CGCGCGGGCG CCGAGGCCGC CGCGGCCGGC CTCGCCGAGG CGGGCGGGCG CGCCATGGCG
GTCGCGGTCG ACGTGGCCGA TCCGGCCTCC ATCGCCGCGA TGGTGGAGGC GATCCTCGCC
CGGCACGGGC GCCTCGACAT CCTGGTCAAC AATGCCGGGG TCGGGGGCAA CACGCCCTTC
CTGGAGACGC GGCTGGAGGA TTGGAACCGC ATCATCGGCA TCAACCTGAC GGGCGCCTTC
CTGGTGGCGC AGGCCTGCGC CCGGGAGATG GTCCGCGGCG GCGGCGGCAA GATCGTCAAC
ATCGCCTCGC TGTCCGGCCA GCGCGGCGGC GACGGCCGGG CGGCCTACGG GGCGGCCAAG
GCCGGGCTCG AACTCCTCAC CAAGGTGATG GCGGTCGAAC TCTCCGAGCA CGGCATCAAC
GTCAACAACA TCGCGCCCGG CGCGATCGAG ACCGAGATGG CGCGGTTCGC CCACGACGCG
GCGACCCGGG CGGCCTACGG CTACCTGATC CCGATGACCC GCTACGGCAC GCCGGAGGAG
ATCGCCGACG CCGCGGTCTT CCTGTGCTCG GACGAGGCCC GCTACGTCCA GGGCCACACG
CTCAACGTCG ACGGCGGCTT CCGGGCGGCG GGCCTGATGT TCAAGCGCGC CGCGCCCCCC
GCCGCCGGAG CGGCCCCGAC GCTAACGACG AACGGAGGAA CCCCATGA
 
Protein sequence
MTGRLADKVA LVTGGARGIG LAVARAFARE GAALVIADVN RAGAEAAAAG LAEAGGRAMA 
VAVDVADPAS IAAMVEAILA RHGRLDILVN NAGVGGNTPF LETRLEDWNR IIGINLTGAF
LVAQACAREM VRGGGGKIVN IASLSGQRGG DGRAAYGAAK AGLELLTKVM AVELSEHGIN
VNNIAPGAIE TEMARFAHDA ATRAAYGYLI PMTRYGTPEE IADAAVFLCS DEARYVQGHT
LNVDGGFRAA GLMFKRAAPP AAGAAPTLTT NGGTP