| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1643 |
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| Symbol | |
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| ID | 6132827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 1836203 |
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| End bp | 1837882 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641641901 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001768570 |
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| Protein GI | 170739915 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.147049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACA GCGCCACGCC CCGCTCCGGC GGCCGGATCC TCGTCGATCA GCTCCTCGTG
CACGGGGTGC GGGACGCCTT CTGCGTGCCG GGCGAGAGCT ACCTCGCGGT GCTCGACGCG
CTCCACGACG CCGCGATCCG CCTCACCGTC TGCCGCCAGG AGGGCTCCGC CGCCATGATG
GCCGAGGCGG CCGGCAAGCT CACGGGCGAG CCCGGCATCT GCTTCGTCAC CCGGGGCCCC
GGCGCCATGA ACGCGGCGCC CGGCCTGCAC GTGGCGCGCC AGGATTCGAC GCCGCTGATC
CTGTTCGTCG GCCAGGTCGA GCGCGGCGCG CGCGAGCGCG AGGCCTTCCA GGAGATCGAT
TACCGGGCGG TGTTCGGCAC GGTGGCCAAG TGGGTGACCG AGGTCGAGGA CCCGGCCCGC
CTGCCGGAAC TGATCTCCCG CGCCTTCCAC GTCGCCACGG CGGGCCGGCC CGGCCCGGTC
GTGGTGGCCC TGCCGGAGGA CGTGCTCACC GCCACCGCCG CGGTGGCGGA CGCGCCGCCC
TACGCGCCGA CCGAGACCCA TCCGGCGCTG GCCCAGATGG TGGCGCTGCA GCGGCTCCTC
GGCGAGGCCG AGCGGCCCCT CGCGCTCCTC GGCGGCAGCC GCTGGAGCGA GGCGGCCGTG
CGGCGCCTCG CGCGCTTCGC CGGCCTGTTC CGCCTGCCCG TCGCCTGCTC GTTCCGCCGC
CAGGGGCTGT TCCCGGCCGA CCACCCGAGC TACGCGGGCG ATCTCGGGCT CGGCGCGAAT
CCGCGGCTCC TCGCCCGCAT CCGGGAGGCC GACCTCCTGC TCCTGGTGGG CGGGCGCCTC
GGCGAGATCC CCTCGCAGGG CTACAGCCTG CTCGACATTC CCGGGCCGCG CCAGCGCCTC
GTCCACGTGC ATCCGGATCC CGAGGAGCTC GGCCGGGTCT ACCGGCCGCA CCTCGCCGTC
AACGCGACCC CCGCCGCCTT CGCGGCGGCG ATCGAGACCG TGCAGCCGCC CGCCCGGCTG
CCCTGGGCGG AGGGGACCGA CGAGGCGCAC GCGTCCTACC TCGCCTGGAG CGATCCCGCC
CGCGTCGCCA CCCCGGGCGA ACTCCAGATG GGCGGCGTGA TGGCGCATCT GCGCGAGGTG
CTGCCCGCCG ACGCGATCCT GTGCAACGGG GCCGGCAACT TCGCCACCTG GGTGCACCGC
TTCTGGCCCT TCCGGGCCTT CGACGGGCAA CTCGCCCCGA CCTCCGGCTC GATGGGCTAC
GGCGTCCCGG CCGCGGTGGC GGCCAAGCGC CTGCGGCCGG AGCGCACCGT GGTGGCGGTG
TCGGGCGACG GCGACTTCCT GATGAACGGG CAGGACTTCG CCACCGCCGT GCAGTACGGC
CTGCCGATCC TGGTCATCCT GGTCGACAAC GGCATGTACG GCACGATCCG GATGCACCAG
GAGCGGGAAT ACCCGGGCCG CGTCTCGGGC ACGAGCCTGC GCAACCCGGA TTTCGCCGCC
TACGCGACGG CCTTCGGCGG CTACGGCGAG CGGGTGACCC GGACCGAGGA CTTCCCCGAA
GCCCTCGCCC GCGCCCGCGC CTCGGGCCTG CCGGCGATCC TGCACTGCCC GATCGACCCC
GAGGCGATCA CCCCGACCAC CACTCTCACG GCGCTGCGGG AGCGCGGGCG GGCGACCTGA
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| Protein sequence | MPDSATPRSG GRILVDQLLV HGVRDAFCVP GESYLAVLDA LHDAAIRLTV CRQEGSAAMM
AEAAGKLTGE PGICFVTRGP GAMNAAPGLH VARQDSTPLI LFVGQVERGA REREAFQEID
YRAVFGTVAK WVTEVEDPAR LPELISRAFH VATAGRPGPV VVALPEDVLT ATAAVADAPP
YAPTETHPAL AQMVALQRLL GEAERPLALL GGSRWSEAAV RRLARFAGLF RLPVACSFRR
QGLFPADHPS YAGDLGLGAN PRLLARIREA DLLLLVGGRL GEIPSQGYSL LDIPGPRQRL
VHVHPDPEEL GRVYRPHLAV NATPAAFAAA IETVQPPARL PWAEGTDEAH ASYLAWSDPA
RVATPGELQM GGVMAHLREV LPADAILCNG AGNFATWVHR FWPFRAFDGQ LAPTSGSMGY
GVPAAVAAKR LRPERTVVAV SGDGDFLMNG QDFATAVQYG LPILVILVDN GMYGTIRMHQ
EREYPGRVSG TSLRNPDFAA YATAFGGYGE RVTRTEDFPE ALARARASGL PAILHCPIDP
EAITPTTTLT ALRERGRAT
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