Gene M446_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1623 
Symbol 
ID6132408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1815431 
End bp1816576 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID641641886 
ProductTDP-4-oxo-6-deoxy-D-glucose transaminase 
Protein accessionYP_001768555 
Protein GI170739900 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.203611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG AGTCCGAGTC CAGGATCCCG TTCGGGCGCC CCACGGTGGT CGGGCGGGAG 
TTCGACTACA TCGCGGATGT CCTGCGCAAC GGCAGCATGG CGGGGGGCGG GCCGTACACG
CAGCGCTGCG AGGAGTGGCT CAAGGCCGAA CTCGGCACGC ACCGGGCGCT GCTGACGCAT
TCCTGCACGG CCGCCCTGGA GATGGCCGCG ATCCTGGCGG AGGTCGGGCC CGGCGACGAG
GTCGTGATGC CCTCCTTCAC CTTCTCGGCC ACCGCCACCG CCTTCGTGCT GCGCGGCGCC
ACGCCGGTCT TCGTCGACAT CAGGCCCGAC ACCCTCAACA TCGACGAGCG CCTCATCGAG
GGCGCGCTCA CCCCCCGCAC CAGGGCGATC GCGGTCGTCC ACTATGCCGG GCGGGCCTGC
GCGATGGACG CCGTCATGGC GGTGGCGAAC GCGCGCGGGC TCGTGGTGGT GGAGGATGCC
GCCCACGCCC ATCTGGCGCG GGACGGGGCG CGGCCCCTCG GCACGATCGG GCATCTCGGC
TGCCTGTCGT TCCACGAGAC CAAGAACGTG ATCGCCGGCG AGGGCGGCGC GCTCCTCGTC
AACGACCCCC GCCTCGCCGC GCGCGCCGAG ATCGTGCGCG ACAAGGGCAC CGACCGCAGC
CGCTTCCTGA GGGGCGAGGT CGACAAGTAC ACGTGGCAGG ATGTCGGCTC CTCCTACGGC
CCGAGCGAGA TCGTGTCGGC GTTCCTGCTG GCCCAGCTCG AGCGCGCGGC GGCGATCTGC
GACGAGCGGC GCGCCCTCTG CGACGCCTAC CGGGCCGGCC TCGCCCCGCT CGCCGCGCGC
GGCCTCGTCA CCCTGCCGGA GGCGGCGGGC ACCCAGACGA ACGGCCACAT CTTCTGGCTG
CTGACGCGCG ACGAGGACAC CCGCAACCGC CTCCTGGCGC ATCTGGGCGC GCGCGGCATC
CAGGCCACCT TCCACTACGT GCCGCTCCAT TCGGCGCCGG CCGGGCGGCG CCACGGGCGG
GCCGGGTCGA GCCTCGCGGT CACGGATTCG GTCAGCGCGC GCCTCGTGCG GCTGCCGCTC
TTCCTCAACA TGACGGGGGG CGAGATCGCC CGGGTCGTGG CCGCGGTCGA GGCCTTCTAC
GCCTGA
 
Protein sequence
MTIESESRIP FGRPTVVGRE FDYIADVLRN GSMAGGGPYT QRCEEWLKAE LGTHRALLTH 
SCTAALEMAA ILAEVGPGDE VVMPSFTFSA TATAFVLRGA TPVFVDIRPD TLNIDERLIE
GALTPRTRAI AVVHYAGRAC AMDAVMAVAN ARGLVVVEDA AHAHLARDGA RPLGTIGHLG
CLSFHETKNV IAGEGGALLV NDPRLAARAE IVRDKGTDRS RFLRGEVDKY TWQDVGSSYG
PSEIVSAFLL AQLERAAAIC DERRALCDAY RAGLAPLAAR GLVTLPEAAG TQTNGHIFWL
LTRDEDTRNR LLAHLGARGI QATFHYVPLH SAPAGRRHGR AGSSLAVTDS VSARLVRLPL
FLNMTGGEIA RVVAAVEAFY A