Gene M446_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1397 
Symbol 
ID6129503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1537797 
End bp1538642 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content72% 
IMG OID641641677 
Product2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 
Protein accessionYP_001768347 
Protein GI170739692 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.154752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG CCGATCTCGC CCGGACCATC GAAGCCGCCT GGGAGGACCG CGCGGACGTG 
ACGGCCGCCA CCCAGGGCCC CGTGCGCGAG GCCGTCGAGG CGGCGCTCGC CCTCCTGGAT
TCCGGGCAGG TCCGGGTCGC CGAGAAGTCC GGCAACGCCG ACTGGCAGGT GAATCAGTGG
CTGAAGAAGG CGGTGCTGCT GTCCTTCCGC CTCACCGACA TGGAGCTGAT CTCCGGCGCG
CCGGGCGGCG CGGCGTGGTG GGACAAGGTG CCGTCGAAGT TCGACGGCTG GGACGCGGAG
CGCTTCCGGC AGGCGGGCTT CCGCGCGGTG CCGGGCGCCA TCGTGCGCCG CAGCGCCTTC
ATCGCTCCGG GCGCGGTGCT GATGCCCTCC TTCGTCAATC TCGGCGCCCA CGTGGGCGAG
GGCACGATGG TCGACACCTG GGCGACGGTC GGCTCCTGCG CGCAGATCGG GAAGAACTGC
CACATCTCCG GCGGCGCCGG CATCGGCGGG GTGCTGGAGC CGCTGCAGGC CAACCCGGTC
ATCATCGAGG ACAATTGCTT CATCGGCGCC CGCGCCGAGG TGGCCGAGGG GGTGATCGTC
GGCGAGGGCA GCGTGCTCTC GATGGGCGTC TATCTCGGCG CCTCGACCAA GATCGTCGAC
CGCGCCACCG GGGAGGTCGT CTACGGCCGC GTGCCGCCCT ACTCGGTGGT GGTCTCGGGC
TCGCTGCCCG GCAAGGCGCT GCCGGACGGC GCGCCCGGCC CGGCGCTCTA CTGCGCGGTG
ATCGTCAAGC GGGTCGATGC CGGCACGCGG GCGAAGACCG GCATCAACGA GCTGCTGCGG
GACTGA
 
Protein sequence
MSHADLARTI EAAWEDRADV TAATQGPVRE AVEAALALLD SGQVRVAEKS GNADWQVNQW 
LKKAVLLSFR LTDMELISGA PGGAAWWDKV PSKFDGWDAE RFRQAGFRAV PGAIVRRSAF
IAPGAVLMPS FVNLGAHVGE GTMVDTWATV GSCAQIGKNC HISGGAGIGG VLEPLQANPV
IIEDNCFIGA RAEVAEGVIV GEGSVLSMGV YLGASTKIVD RATGEVVYGR VPPYSVVVSG
SLPGKALPDG APGPALYCAV IVKRVDAGTR AKTGINELLR D