Gene M446_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1241 
Symbol 
ID6134157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1363399 
End bp1365198 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content71% 
IMG OID641641528 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001768199 
Protein GI170739544 
COG category[C] Energy production and conversion 
COG ID[COG1038] Pyruvate carboxylase
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA ACGAGGTCCG CCTGCCCGAC ATCGGGGACT TCAAGGACGT CCCAGTCATC 
GAGGTGGTGG TGAAGCCGGG CGACACGATC GGGGTGGACG ACACCCTGAT CGTGCTCGAA
TCCGACAAGG CGACGATGGA CGTGCCCTCG CCGGTCTCCG GCACGGTGGC GGAGATCAAG
GTCAAGCCGG GCGACAAGGT CTCGCAGGGC GACCTGATCC TGCTGATGAC CGAGGCGGCC
GGGGCGGGCG CGGCGGCGCC CGCGGGCGGG CCGCCCGCCC ACGCGCCCGG CGAGGGGCAA
GCCGGCTATG GCTCCTCGGC GAGGGGCGGC GGCAACGGCG CGACGCCCCC CGCGCCCCAG
GCCGCCGCGC CCGTCTCGGG CGAGGAGATG CGCGCCGAGG TGCTGGTGCT CGGCGCCGGA
CCGGGCGGCT ACACGGCGGC CTTCCGGGCC GCCGACCTCG GCAAGAAGGT GGTGCTGGTC
GAGCGCTGGG CCTCGCTGGG CGGCGTGTGC CTCAACGTCG GCTGCATCCC CTCGAAGGCC
CTGCTCCACG CCGCCAAGGT GATCGACGAG AGCCACGGCA TGGCGGCGCA CGGCATCAGC
TTCGCGAGCC CGCAGATCGA CATCGACAAG CTCCGGGGCT GGAAGGACGG CGTCGTCAAG
CGCCTCACCG GCGGCCTCGG GGGCCTCGCC AAGCAGCGCA AGGTCACGGT CGTCACCGGC
ACCGCCCGCT TCGTCAGCCC GCACCAGATC GCGGTCGAGC ATGAGGGCCA GACCCGGGTG
ATCGGCTTCG AGCAGGCGAT CATCGCGGCG GGCTCCGAGC CGGTGAAGCT GCCCTTCATC
CCGCATGACG ACCCGCGGGT GATCGATTCC ACGGGGGCGC TCGAACTCGA CGGCATCCCC
CAGCGCCTGC TCGTCATCGG CGGCGGCATC ATCGGGCTGG AGATGGCCAC CGTCTACCAC
GCGCTCGGGT CCAAGGTGAC CATCGTCGAG CTGATGGACC AGATCATCCC GGGGGCCGAC
AAGGACATCG TCACCCCGCT GATGAAGCGG ATCTCCAAGC AGTATGAGGC GATCCACCTC
AAGGCCAAGG TCACGGCCGT CGAGGCTCTG CCCGAGGGGC TGAAGGTCTC CTTCGAGGGC
GGCTCGGCGC CGGCCCACGA CACCTTCGAC AAGATCCTGG TGGCGGTGGG GCGCCGGCCC
AACGGCAAAC TCATCGGCGC GGAGGCCGCG GGCGTGATCG TGGACGAGCG GGGCTTCGTC
CCGGCCGACA AGCAGATGCG CACCAACGTG CCGCACATCT TCGCCATCGG CGACGTGGTC
GGCCAGCCGA TGCTGGCCCA CAAGGCGACG CACGAGGGCA AGGTCGCGGC CGAGACGGCG
GCGGGCAAGA ACTCGTTCTT CGACGCGAAG GTGATCCCGT CGGTGGCCTA CACCGACCCG
GAGGTGGCCT GGGTCGGGCT GACCGAGAAC GAGGCCAAGG CCAAGGGGCT CAAGGTCGGC
AAGGGCGTGT TCCCGTGGGC GGCGAGCGGG CGCTCGCTGT CGCTGGGGCG CGACGAGGGC
CTGACCAAGG TGCTGTTCGA CGAGGCGACC GACCGCATCG TCGGCTGCGG CATCGTCGGG
CCGTCCGCGG GCGACCTGAT CGCCGAAGCC GCGCTCGCGA TCGAGATGGG GGCGGATGCG
AGCGACATCG GGCTGACCAT CCACCCGCAC CCGACCCTGT CCGAGACGGT CGGCATGGCG
GCGGAGGCCT TCGAGGGCAG CATCACCGAC CTCTACATGC CAAAAAAGAA GACTCACTAA
 
Protein sequence
MSSNEVRLPD IGDFKDVPVI EVVVKPGDTI GVDDTLIVLE SDKATMDVPS PVSGTVAEIK 
VKPGDKVSQG DLILLMTEAA GAGAAAPAGG PPAHAPGEGQ AGYGSSARGG GNGATPPAPQ
AAAPVSGEEM RAEVLVLGAG PGGYTAAFRA ADLGKKVVLV ERWASLGGVC LNVGCIPSKA
LLHAAKVIDE SHGMAAHGIS FASPQIDIDK LRGWKDGVVK RLTGGLGGLA KQRKVTVVTG
TARFVSPHQI AVEHEGQTRV IGFEQAIIAA GSEPVKLPFI PHDDPRVIDS TGALELDGIP
QRLLVIGGGI IGLEMATVYH ALGSKVTIVE LMDQIIPGAD KDIVTPLMKR ISKQYEAIHL
KAKVTAVEAL PEGLKVSFEG GSAPAHDTFD KILVAVGRRP NGKLIGAEAA GVIVDERGFV
PADKQMRTNV PHIFAIGDVV GQPMLAHKAT HEGKVAAETA AGKNSFFDAK VIPSVAYTDP
EVAWVGLTEN EAKAKGLKVG KGVFPWAASG RSLSLGRDEG LTKVLFDEAT DRIVGCGIVG
PSAGDLIAEA ALAIEMGADA SDIGLTIHPH PTLSETVGMA AEAFEGSITD LYMPKKKTH