| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1175 |
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| Symbol | |
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| ID | 6131807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 1301397 |
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| End bp | 1303790 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641641462 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001768134 |
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| Protein GI | 170739479 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.217594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGGA GGGCGAAGGC TTGGCGCGCC GTCCTCGAGA TGGCGCTCGC CCTCGGGAGC
GGCGGGACTC CGCCGGCGGG CGCCTCCGAC TACGGCCTGC GCGGCGCGAT CGAGAGCGGC
CCGCCCGCCG GCCCGGCCCC GGCGCTGGTG CGGCGGGGCA CCGACGTCTT CGTGCGCGGC
GCGAGGGAGG CGGCCGCGCC GCTCCCGGAG GGCAACGTCA CGCTCAACCT CGTCAACGCC
CCGGTGGCGG TGGCGGCGCG GGCGGTGCTC GTGGACGCGC TCGGCTGGAG CTACAGCCTC
GACGAGCGCG TCGCCGGCAC CGTCACCCTG CAGACGGCGG GGCCGGTCAG CCGCGCGGCC
CTGCTCGGCC TGTTCGAGAG CGCGCTCGCG GCGCGCGGCG TCACCCTGCG CCGCCGGGGC
AGCCACGTGC AGATCCTCCC CGCGGGCGCC CCGCCGCCGC CCTCCGGGGT GCGCGGCACG
CCCGATGCCG CGGGCGAGCC CGGGGCGCAG GTCATCCCCC TGCGCTGGAT CTCGGCGGGC
GAGATGCAAT CCATCCTCGC GGCGGTGGCG CCGCGCGACC TCGTCCTGCG GGCCGACCGC
ACCCGCAACC TGCTCATCGT CTCCGGCGAC CGCGCCCAGA TCCAGGCCCT GCGCGAGACG
ATCGCGGTCT TCGACGTCGA CTGGATGCGC GGCCTCTCGG TGGCGATGGT GCCGGTGCGG
CGGGCGAATC CCTCGGCGAT CGCCCGCGAC CTGGCGGAGG TGTTCGGCGG CGAGGCCTCG
GGGGCGGGCG CGATGATCCG CTTCCTGCCC AACGAGGCGC TCGGGGCGAT CCTGGTGGTG
AGCTCGCGCG CCCTCTACCT CGACCGGGCG CGGGAATGGA TCGCCCGGCT CGAAGTCGTG
GCGGCCGATC GCGAGCGGCA GCTCTTCGTC TACCGCATCC AGAACCGCTC GGCGAAGGAG
CTCGCCGCCG TGCTCCAGGG GGTCGTCTCC TCCGACCCGA CCATGGCGAG CGCGCCGGGC
GCCGCCGCCT ACGGTTCCGC GGGCGGCGGG GCGGGCCTGA GCGGCGGCTT CGCCGATGCG
GGCGGCTTCG GCGGCTTCGG CGGCGGGGCG GCCGGGACGG GTCCGGCGGG CGCGGGAGGG
TTCGGCGGCC CGCCGGGCGG CGCCGGCGCT CCCGCGGGCG GGGGGCCGGG GGCAGGCCCG
TCCGGCGCCT TCGGCGGCGG ATCGCCCGGC GCCTTCGGGG GGCCGGCCGC TGCCCTCGGC
CCGGGCGGGG CCGGGTCCGG CGTCTCCGGC GCCGGCGGGT TCGGCGGCGG GGCCATGGAG
GCGGGCTTCT CGGGCAGCGC CCTCTCCGGC ATGGGCGAGG CCGGGGGCTC GGGCGCGGTC
TACGGCAGCG GCGCGCGGCG GGGCGGGATC GGCATCGTCG CCGACGAGAC CAACAACAGC
CTCGTGATCT CGGCGACCCG GACCCAGTAC GAGAAGATCC TCCGGATCCT CGGCCGCCTC
GACGCGCGCC CGACCCAGGT GCTGCTGGAG ACGGTGATCG CCGAGGTGAC GCTGAACGAC
AAGCTCGAAT TCGGGGTGCA GTGGTTCCTG AAGAACGGGG GCTCGCGCTT CAACCTCGCC
CAGTCCGACA CGGCGGCGTC GGTCGCGAGC GGGACGAGCG GCGCCGGCGC CCTGGTCAGC
GCGGCGATGC GCGGCGTGCC GGGCTTCAAC TACCTGCTCA ACGACGCGGA TTTCCACGTC
GTGCTCAACG CCCTGCGGGG CGTGACCCGG GTCAACGTGC TCTCCTCGCC CAACATCACG
GTGCTCGACA ACCGCACCGC GCGCCTCCAG ATCGGCGACC AGGTGCCGAT CGTGAAGCAG
AGCGGCCAGA GCGCGCTCGC CGGCAACGCG CCGATCCTCA ACCAGATCGA GCTCAAGGAC
ACCGGCGTGA TCCTCTCGGT CACGCCGCGG GTGAACAAGA ACGGGCTCGT CGTCCTCGAC
ATCAACCAGG AGGTCAGCGA CGTCGTGCCG ACCACGACGT CGAACATCAA CTCGCCCACC
ATCCGCCAGC GGCGGGTCGC GACCTCGGTG GCGGTGTCGG ACGGGCACAG CCTGGCGATC
GGCGGCATGG TCCAGGAGAA GGCGCAGATC GGCACCGAGG CCCTGCCGGT GCTCGGCGAC
CTCCCGGTGA TCGGCCCCGC CTTCCGCAAC AAGTCGGATC TGCGCGTGCG CACGGAACTG
ATCGTGTTCC TGCGCCCGAA GGTGATCCGC GGCACGGCCG ACGCCGACCG CATCGCCAGC
GACTTCCGCG ACCAGGTCCG GACGATGATG CCGGTGCGCC CGGTCAGCGC GCCGCCGCCT
CTGGAAGAGG TGCCAGCCGG AGTGCAGGGG CTGCGCCAGC GGATCCTGGA CTGA
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| Protein sequence | MRGRAKAWRA VLEMALALGS GGTPPAGASD YGLRGAIESG PPAGPAPALV RRGTDVFVRG
AREAAAPLPE GNVTLNLVNA PVAVAARAVL VDALGWSYSL DERVAGTVTL QTAGPVSRAA
LLGLFESALA ARGVTLRRRG SHVQILPAGA PPPPSGVRGT PDAAGEPGAQ VIPLRWISAG
EMQSILAAVA PRDLVLRADR TRNLLIVSGD RAQIQALRET IAVFDVDWMR GLSVAMVPVR
RANPSAIARD LAEVFGGEAS GAGAMIRFLP NEALGAILVV SSRALYLDRA REWIARLEVV
AADRERQLFV YRIQNRSAKE LAAVLQGVVS SDPTMASAPG AAAYGSAGGG AGLSGGFADA
GGFGGFGGGA AGTGPAGAGG FGGPPGGAGA PAGGGPGAGP SGAFGGGSPG AFGGPAAALG
PGGAGSGVSG AGGFGGGAME AGFSGSALSG MGEAGGSGAV YGSGARRGGI GIVADETNNS
LVISATRTQY EKILRILGRL DARPTQVLLE TVIAEVTLND KLEFGVQWFL KNGGSRFNLA
QSDTAASVAS GTSGAGALVS AAMRGVPGFN YLLNDADFHV VLNALRGVTR VNVLSSPNIT
VLDNRTARLQ IGDQVPIVKQ SGQSALAGNA PILNQIELKD TGVILSVTPR VNKNGLVVLD
INQEVSDVVP TTTSNINSPT IRQRRVATSV AVSDGHSLAI GGMVQEKAQI GTEALPVLGD
LPVIGPAFRN KSDLRVRTEL IVFLRPKVIR GTADADRIAS DFRDQVRTMM PVRPVSAPPP
LEEVPAGVQG LRQRILD
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