Gene M446_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1017 
Symbol 
ID6129778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1133889 
End bp1134503 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID641641310 
ProductNapC/NirT cytochrome c domain-containing protein 
Protein accessionYP_001767982 
Protein GI170739327 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA TTGCTAGGGC GTGGTCCTGG TTCTGGCTGA ACCCTTGGGT GCGTACGGCC 
ACGCGTCCTC CCGTCACCCT GTCGCTGGCT TTCCTCACGC TAGGCGGCTT CGTTGCAGGA
GTCCTGTTCT GGGGCGGCTT CAACACAGTC CTGGAGCACA CCAACACCGA GAAATTCTGC
ACGTCGTGCC ACGAGATGAA GACGAACGTC TTCGAGGAGC TCAAGGGCAC GATCCACTAC
ACCAACCGCT CGGGCGTTCG CGCGAGCTGT CCCGATTGCC ACGTGCCACA TCAGTGGACC
GACAAGATCG CGCGCAAGAT GCAAGCCTCC AAAGAAGTCT GGGGGCACAT CTTCGGCTCG
ATTGACACAC GTGATAAGTT CCTGGATCTG CGCCGTCACT TGGCAGAACA CGAATGGGCG
CGGATGAAGG CCAACGACTC CTTGGAATGT CGCAACTGCC ACAGCGCCCA GTCGATGGAC
GTGTCGAAGC AGAATCCGCG GGCGGCGGCA GCTCACGAGA AGGATCTGTT CACAGGCCAG
AAGACGTGCA TCGACTGCCA CAAGGGCATC GCGCACAAGC TTCCCAACAT GCAAGGGGTT
CCAGGATGGC AATGA
 
Protein sequence
MAAIARAWSW FWLNPWVRTA TRPPVTLSLA FLTLGGFVAG VLFWGGFNTV LEHTNTEKFC 
TSCHEMKTNV FEELKGTIHY TNRSGVRASC PDCHVPHQWT DKIARKMQAS KEVWGHIFGS
IDTRDKFLDL RRHLAEHEWA RMKANDSLEC RNCHSAQSMD VSKQNPRAAA AHEKDLFTGQ
KTCIDCHKGI AHKLPNMQGV PGWQ