| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0628 |
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| Symbol | |
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| ID | 6132859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 729340 |
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| End bp | 731046 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641640948 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001767623 |
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| Protein GI | 170738968 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.639244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00714589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAACGACT TCGCCCATCT CCTCGACCGC CTCGCCTACG AGCCCCGGCG CACCGCGAAG
CTGCGGCTGC TCCAGGACTA CTTTTCCCGC GCGCCCGATC CCGAGCGCGG CACCGCGCTC
GCCGCCATGA CCGGCGCCCT GACCTTCCGG GAGGCGAAGC CCACCCTGAT CCGCGGCCTC
GTCGAGGCGC GGGTCGACCC GGTGCTGTTC CGGATGTCGT ACCACTACGT CGGCGACCTC
GCGGAGACGA CCGCCCTGAT CTGGCCCGCG CCCGCGGCGC CGGAGCCCGG CGGGATCGGC
CACAACGCCC CGCCGCCGCA GGTGCCGAGC CTGAGCGAGG TGGTCGAGGC GCTCGCCACC
ATCGGCAAGG CCGAGCTGCC CGCCCGCATC GCCGCCTGGC TCGACGTCCT CGACGAGACC
GGCCGCTGGG CGCTCATCAA GCTCATCACG GGCGAGCTGC GGGTCGGCGT CTCGGCGCGC
CTCGCCAAGA CCGCGGTGGC GAGCCTCGGC GGCGTCGAGC CGGACGCGGT CGAGGAGGTC
TGGCACGGGC TCAAGCCCCC CTACCTGCCC CTCTTCGCCT GGGTCGAGGG CCGGGCCGAG
CGGCCCGAGA GCCTCGATCC CGCCCCGTTC CGGCCGCCGA TGCTCTCGCA CCCGGTCGAC
GAGGAGACCG ACTTCGCCAG GCTCGACCCC GCCGCCTTCG CGGCCGAGTG GAAGTGGGAC
GGCATCCGGG TGCAGCTGGT CGGCGGGCGC GACCGCGCCG GGACCGCGGT CGCCCGCATC
TATTCCCGCA CCGGCGAGGA CATCTCCGCC GCCTTCCCGG ACCTCGCCGA GGCGATCCGC
TTCGAGGGCG CCCTCGACGG AGAGCTCCTC ATCCTGCGCG AGGGGCGGGT GCAGAGCTTC
AACGTGCTGC AGCAGCGCCT CAACCGGAAG GCGGTGACGG GCCGGCTGCT CCAGGACTTC
CCCGCCCATG TGCGGGCCTA CGACCTGCTG GCGCTCGACG GCGAGGACCT GCGCCCGCTC
CCCTTCGGGG CGCGCCGCGC CCGGCTCGAA GCCTTCGTGG CCGGCCTCGA CCACGGGCGC
ATCGACCTCT CGCCGCTCGT GCCCTTCGCC GATTGGGAGG CGCTGGCGGC GGCGCGGGCC
GACCCGGCCC AGGCGGGGGC CGGCGAGGAT GCCGACGCGA TCGAGGGCGT GATGCTCAAG
CGCCGCGACA GCCTCTACGT GCCGGGCCGG CCCAAGGGGC CGTGGTGGAA GTGGAAGCGC
GAACCCTACC TCGTCGACGC GGTGATGATG TACGCCCAGC GCGGGCACGG GAAGCGCTCC
TCCTTCTACT CGGACTACAC GTTCGGGGTC TGGCGGGACT CCCCCGAGGG CGGCGAGGAG
CTGGTGCCGG TCGGCAAGGC CTATCACGGC TTCACCGACG AGGAGCTCGC CAAGCTCGAC
CGCTACGTCC GCAACCACAC GGTCAAGCGG TTCGGGCCCG TGCGCGAGGT GGAGTATGGT
CCGCGCCAGG GCTTGGTGCT GGAGATCGCC TTCGAGGGGC TCCAGCGCTC GACCCGGCAC
AAGTCGGGCG TCGCCATGCG GTTTCCCCGG GTGAACCGGA TCCGCTGGGA CAAGCCGCCC
GCCGAGGCCG ACCGGATCGA GACGCTGGAG CGCATCCTGG AGCGGGGCGA GCGCGAGGTG
ATGCCGGGAC GGGAGATGGC GCGATGA
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| Protein sequence | MNDFAHLLDR LAYEPRRTAK LRLLQDYFSR APDPERGTAL AAMTGALTFR EAKPTLIRGL
VEARVDPVLF RMSYHYVGDL AETTALIWPA PAAPEPGGIG HNAPPPQVPS LSEVVEALAT
IGKAELPARI AAWLDVLDET GRWALIKLIT GELRVGVSAR LAKTAVASLG GVEPDAVEEV
WHGLKPPYLP LFAWVEGRAE RPESLDPAPF RPPMLSHPVD EETDFARLDP AAFAAEWKWD
GIRVQLVGGR DRAGTAVARI YSRTGEDISA AFPDLAEAIR FEGALDGELL ILREGRVQSF
NVLQQRLNRK AVTGRLLQDF PAHVRAYDLL ALDGEDLRPL PFGARRARLE AFVAGLDHGR
IDLSPLVPFA DWEALAAARA DPAQAGAGED ADAIEGVMLK RRDSLYVPGR PKGPWWKWKR
EPYLVDAVMM YAQRGHGKRS SFYSDYTFGV WRDSPEGGEE LVPVGKAYHG FTDEELAKLD
RYVRNHTVKR FGPVREVEYG PRQGLVLEIA FEGLQRSTRH KSGVAMRFPR VNRIRWDKPP
AEADRIETLE RILERGEREV MPGREMAR
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