Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0582 |
Symbol | |
ID | 6131259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 685163 |
End bp | 686563 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641640903 |
Product | integrase catalytic region |
Protein accession | YP_001767578 |
Protein GI | 170738923 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00633094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGTC GGCGGCGTTC GGATCGGGCA CTTCGCGAGA AGCTGCGGTC ACCGGGTCGT CCCGGGGTCG GTCTGCGCGA GACGCGGCGG GGGTTCTGGG CGTTCCTCGC GCAGGGTCTC TCCAGCGAGG TCGCAGCGAT GAAGCTCGGG ATCTCGCCAC CGGTCGGCTC GCGGTGGTTC CGGACAGCAG GCGGAATGGC ACCTTCCCAC CTGTCACCAT CATCCAAGTC GCCTTCTGCG CGCTACCTGT CGTTGGCTGA GCGGGAGGAG ATCGCGATCC TACAAGCGCA AGGTCACGGG GTCCGGGACG TCGCTCGGCG TCTGGGACGG GCGGCGTCGA CCATCTCGCG GGAATTGCGC CGCAATGCGG CGACCCGCAG TGGCGGCCTG GACTATCGCG CCACGACCGC GCAGTGGCAC GCTGAACGCG CGGCACGCCG GCCCAAGCCA GCAAAACTGG CGGGGAACGC AGCGCTGCGG ACGTACGTGC AGGAGCGGCT CGCCGGAACT GTCGCGACAC CGGGCGGGAG CGCTCTGCCT GGCCCTAGCG TTGCCTGGAA GGGACGGCGG CACGGGCGAC GCCAGAGCCG GCGATGGGGT CGATCCTGGA GTCCGCAGCA GATCGCCGAG CGCCTACGGC TCGACTTTCC GGGCGATACG ACGATGCGCA TCAGTCACGA GGCGATCTAT CAGGCGCTCT ACATCCAGGG CCGGGGCGCG CTGAAGCGTG AGCTGACCGC GTGTCTTCGC ACAGGACGGG CTTTGCGTGT GCCGCGGGCC CGCAGCCTGG GCCGAGGCAG GTCGTTCGTC ACCCCCGAGG TGCTCATCAG CGAGCGTCCG CCCGAGGTGG AGGACCGCGC GGTGCCGGGG CACTGGGAAG GAGATCTGAT CCTGGGTCTG AAGAGTTCGG CGATCGGGAC CCTGGTCGAG CGCACGACGC GCTTTACGAT GCTGCTGCAT CTTCCGCCGA TGGACGGCCA TGGGGTGACA CCGCGTGCGA AGAACGGCCC GGCGCTGGCG GGGCACGGGG CCCAGGCGGT GCGCGAGGCG ATCGCCGGCA CGATCGCGCG CTTGCCCGAG CAGCTGCGGC GCTCGTTGAC CTGGGACCAG GGTACCGAGA TGGCCGAGCA CGCGCGCTTG CGGATCGACG CGGGTCTGCA GGTCTACTTC TGCGATCCAC GCTCACCCTG GCAGCGGGGG ACGAACGAGA ATACGAACGG GTTACTGCGA CAGTACTTCC CGAAAGGAAC GGATCTGAGC GCCCACAGCG CGAACGATCT TGCTGCTGTG GCCGCAGCCC TCAACAGCAG ACCGCGCAAG ACGCTGAACT GGAAGACGCC GGCAGAGGCG CTCGACGCTG TGCTGGCTGC CGTGCAAGAT GGTGTTGCGA CGACCGCTTG A
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Protein sequence | MAGRRRSDRA LREKLRSPGR PGVGLRETRR GFWAFLAQGL SSEVAAMKLG ISPPVGSRWF RTAGGMAPSH LSPSSKSPSA RYLSLAEREE IAILQAQGHG VRDVARRLGR AASTISRELR RNAATRSGGL DYRATTAQWH AERAARRPKP AKLAGNAALR TYVQERLAGT VATPGGSALP GPSVAWKGRR HGRRQSRRWG RSWSPQQIAE RLRLDFPGDT TMRISHEAIY QALYIQGRGA LKRELTACLR TGRALRVPRA RSLGRGRSFV TPEVLISERP PEVEDRAVPG HWEGDLILGL KSSAIGTLVE RTTRFTMLLH LPPMDGHGVT PRAKNGPALA GHGAQAVREA IAGTIARLPE QLRRSLTWDQ GTEMAEHARL RIDAGLQVYF CDPRSPWQRG TNENTNGLLR QYFPKGTDLS AHSANDLAAV AAALNSRPRK TLNWKTPAEA LDAVLAAVQD GVATTA
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