Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0561 |
Symbol | |
ID | 6130566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 669976 |
End bp | 671010 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641640882 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001767557 |
Protein GI | 170738902 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.471282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.306024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CGGATTCCAA GCCGAAGGGC GGCCTCTCGC GCCGCAGCCT GCTGACCGCG GCCGCCGCCG TCCCGCTGGT CGCGATCCGC ACCCGGCCGG CGCGCGCGGC CGAGTTCACC TACAAGCTCG CGACCGGCCA ATCCCTCACC CAGCCGATCA ACGCCCGCCT CGACCAGGCG ACGCAGCGGA TCCGCGAGGC CTCCGGCGGG CGCCTGGAAC TGAAGTTCTT CCCCGCGAGC CAGCTCGGCT CCGACACCGA CCTGATCACG CAGGTGCGCT CGGGCGGGAT CGAGTTCCTC AACATCGCCG GCTCGGTGAT CTCGACCGTC GCGGCGGGGG CGGCGATCAC CAACGTGGGC TTCGCCTTCG CGGATTACGA CCAGGCGTGG CGCGGGGCGG ACGGTCCGAT CGGCCAGTAC GTCCGCACCC AGATCGAGAA GGCCGGTCTC CTCGTCGCCG CCAAGGCCGC GGACAACAGC TTCCGGCAGA TCACCTCGGC CTCGAAGCCG ATCAGGACGC CCGACGACCT CAAGGGCTAC CGCATCCGCG TGCCGGTCTC GCCGATCTTC ACCTCGCTGT TCTCGGCGCT CGGGGCGAGC CCGACCTCGA TCAACTTCAA CGAGCTCTAC ACCGCGCTGC AGACCCGGCT CGTCGACGGT CAGGAGAACG GGCTGGTGGC GATCGACGCC GGCAAGCTCT ACGAGGTCCA GAAATACGTC TCCGAGACCA ACCACATCTG GGACCCGTTC TGGATCGTGG CGAACCGGCG GGCCTTCGGC CGGCTGCCGG AGCCGCTGCA GGAGATCGTG CGGCGCGAGC TCGACCGGGC CGCGCAGGAG CAGCGCGAGG ACGTGGCGCG GCTGAACGGC ACGCTCAAGA CCCAGCTCGT CGCCAAGGGC CTGGTCTTCG AGGCCGCCGA CAAGGACGCG TTCCGCCGCA GCCTCACCCA GGCCGGCTTC TACCGCGACT GGAAGGAGAA GTTCGGCCCC GAGGCCTGGA AGGCGCTCGA ATCCGTGACG GGGGCGCTCG CATGA
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Protein sequence | MTETDSKPKG GLSRRSLLTA AAAVPLVAIR TRPARAAEFT YKLATGQSLT QPINARLDQA TQRIREASGG RLELKFFPAS QLGSDTDLIT QVRSGGIEFL NIAGSVISTV AAGAAITNVG FAFADYDQAW RGADGPIGQY VRTQIEKAGL LVAAKAADNS FRQITSASKP IRTPDDLKGY RIRVPVSPIF TSLFSALGAS PTSINFNELY TALQTRLVDG QENGLVAIDA GKLYEVQKYV SETNHIWDPF WIVANRRAFG RLPEPLQEIV RRELDRAAQE QREDVARLNG TLKTQLVAKG LVFEAADKDA FRRSLTQAGF YRDWKEKFGP EAWKALESVT GALA
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