Gene M446_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0506 
Symbol 
ID6129166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp601184 
End bp601648 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID641640828 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001767503 
Protein GI170738848 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000695312 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTTCT CCAGCCGCGG GAGCGGCCCG TACGGGTCCT CCGCCGACAT CAACGTCACG 
CCGCTCATCG ACGTGATGCT GGTCCTCCTG ATCGTCTTCA TGGTGACGGC ACCGCTGCTG
ACGACCGGGA TGAAGGTGAA CCTGCCGCAA TCCCGGGCCG CCAAGCCCAT CGACCCGAAG
GAGCCGGCGG TCGTCGCCGT TGCCAAGGAC GGCAGGGTCT TCATCGGCAC CGACGAGATC
GCGCTCGACC GGCTCGTCCC GGCGGTGACG GCGGCGATCG AGAACGACCT GTCGCGGGTC
GTTCACCTGA GGGGCGACAA GGACGCCTCC TACGGCGACG TGGTCAAGGT CATGGACCTG
CTCGCATCGA GCGGGATCAC GCACCTCGCC GTGGTCGCCA ACCGCAGGAG CGCCGGCGAG
GCGGGACACC CCGCGCCCCG GCGGGCGACG GGATCCGAGC CATGA
 
Protein sequence
MAFSSRGSGP YGSSADINVT PLIDVMLVLL IVFMVTAPLL TTGMKVNLPQ SRAAKPIDPK 
EPAVVAVAKD GRVFIGTDEI ALDRLVPAVT AAIENDLSRV VHLRGDKDAS YGDVVKVMDL
LASSGITHLA VVANRRSAGE AGHPAPRRAT GSEP