| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0405 |
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| Symbol | |
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| ID | 6133628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 489836 |
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| End bp | 491935 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641640732 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001767408 |
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| Protein GI | 170738753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00905597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.606283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGAG GCGCGGCGGG TCGGAATGGG GCGTGGCGGC GCGTCGTCCC GGCGCTGCTG
CTCGCCGCGG CGCTCGCCGC CGGCGCGGCC GGGCTGTGGC GGGAGATCGG GCGCGATCCC
GGCCTCGACC TCGCGGCGGC CGAGCGCCGC TCGCCCGTGG TCCTCGACCG GGCCGGCGTG
CTCCTGCGCC CCTTCGCGAC GGCGGATGGC CGCTGGCGCC TGCCGCTCGC CCCCGAGGCG
GTCGATCCGC GCTTCCTCAC CCTGCTGATG GCCTACGAGG ACCGGCGCTT CGCCCGGCAT
CCGGGCGTCG ATCCGCTCGC GGTGCTGCGG GCCGCCGGGC AATGGCTGCG GGCGGGACGG
ATCGTCTCGG GCGGCTCGAC CCTCTCGATG CAGGTCGCCC GGCTGGTCGA GCCGCGAGCC
GAGCGCTCGC TCGCCGCCAA GCTGCGCCAA GTGCGGGGGG CGGTCGCGCT CGAGCGGCGG
CTCGGCAAGG CGGGGGTGCT GCGCCTCTAC CTCGCCCTCG CCCCCTATGG CGGGCCGCTC
GAAGGGGTGC GGGCGGCGAG CCTCGCCTAT TTCGGCCACG AGCCGGGGCG CCTGTCGCTG
GCGGAGGCCG CGCTCCTCGT CGCCCTGCCG CAGGCGCCCG AGGCCCGCCG GCCCGACCGC
TTCCCGGAGG CGGCGCGGCG CGCCCGCGAC CGCGTCCTCG ACCTCGCGGC GGCGCGGGGC
GCCGTCCGCC GCGACGAGGC CGAGGCGGCC AAGGCCGAGC CGGTGCCGCA GCGGCGCCGC
CCCTTCCCGA TGCTCGCGGC CCATGCGGCC GAGGCGGCCC TGGCCGAGGC GCCCGACCGG
GCGGTCCACC GCCTGACCAT CGACGCGCGC CTGCAGGCGA GCCTGGAGGC GCTCGCGGCC
GAGCGCGTTG CCGCCCTCGG TCCCGGCCTC TCGACGGCGA TCCTGGTCGT CGACAACGCC
ACCGGCGCGG TGCGGGCGCA TGTCGGCAGC GCCGGCTACC TCGATGCCGG CCGCGCGGGC
GCCATCGACA TGGCCGCCGC CCTGCGCTCG CCGGGCTCGG CGCTGAAGCC CTTCGTCTAC
GCGCTGGCCT TCGAACTCGG CCTCGCCCAT CCCGAGACGC TGATCGAGGA CCGGCCCTCG
CGCTTCGGGG CCGCCTACGC GCCGGAGAAT TTCGACCTCA CCTTCCAGGG CACGGTCACG
GCCCGGCGCG CCCTGCAGAT GTCCCTCAAC GTGCCCGCGG TGGAACTGAT GGAGTTGGTC
GGCCCGGCCC GCTTCATCGC CCGGCTGCGG GCGGGCGGGG CGGGGATCGC GCTCCCCCGC
GACGCCGCCC CCGGCCTGCC GGTGGCCCTC GGCGGGCTCG GCATCACGCT GACCGACCTC
GCCCGGCTCT ACGCGGGCCT CGCCCGGGGC GGCCTCGTGC CCGATCTCGT GCGGCGGCCG
GAGGCCGGGC CGCCGGCCCG CGAGCCGCCC CGCATCGCCG AGGGGGTGGC GGCGTGGTAC
GTCACTGACA TCCTGCGCGG CACGCCGCCG CCCGAGAACG CCCTGCCGAA CCGCATCGCC
TACAAGACCG GCACCTCCTA CGGCTACCGC GACGCCTGGG CGGTGGGATT CGACCGCCGC
ATCACCGTGG CGGTCTGGGT CGGCCGCCCG GACGGGGCGA GCGTGCCCGG CCTGGTCGGG
CGCGTGGCGG CGGCCCCGAT CCTGTTCGAC GCCTTCGCGC GCTGCGGCGG CGAGCCGGAG
CCGGTGCCGC CGGTCCGCGA CGCCCTGGTG ACCAGTACGG CCGGCCTGCC GCCGCCGCTC
CGCCACCTGC GCCGCGACGC CGCCAAGGTG GCGGGCGAGG CGCCGGGAGC CCCGCTCAGG
ATCGCCTATC CGCCGGACGG CGCCCGGGTC GATCTCGGCT TCGCGGAGGG GGCGCCGGCC
GGGCTCGCCC TGAAGGCGCT GGGCGGCACC CTGCCCCTGA CCTGGATGGT GAACAGCCTG
CCCCTGCCCG AGGCCGCCCG CCGGCAGGCG GAGTGGCAGC CGGACGGGGC CGGGTTCGCG
CGGATCTCCG TGATGGACGC GACGGGCGCG AGCGACAGCG TCGTGGTCCG GCTGGAATAG
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| Protein sequence | MAGGAAGRNG AWRRVVPALL LAAALAAGAA GLWREIGRDP GLDLAAAERR SPVVLDRAGV
LLRPFATADG RWRLPLAPEA VDPRFLTLLM AYEDRRFARH PGVDPLAVLR AAGQWLRAGR
IVSGGSTLSM QVARLVEPRA ERSLAAKLRQ VRGAVALERR LGKAGVLRLY LALAPYGGPL
EGVRAASLAY FGHEPGRLSL AEAALLVALP QAPEARRPDR FPEAARRARD RVLDLAAARG
AVRRDEAEAA KAEPVPQRRR PFPMLAAHAA EAALAEAPDR AVHRLTIDAR LQASLEALAA
ERVAALGPGL STAILVVDNA TGAVRAHVGS AGYLDAGRAG AIDMAAALRS PGSALKPFVY
ALAFELGLAH PETLIEDRPS RFGAAYAPEN FDLTFQGTVT ARRALQMSLN VPAVELMELV
GPARFIARLR AGGAGIALPR DAAPGLPVAL GGLGITLTDL ARLYAGLARG GLVPDLVRRP
EAGPPAREPP RIAEGVAAWY VTDILRGTPP PENALPNRIA YKTGTSYGYR DAWAVGFDRR
ITVAVWVGRP DGASVPGLVG RVAAAPILFD AFARCGGEPE PVPPVRDALV TSTAGLPPPL
RHLRRDAAKV AGEAPGAPLR IAYPPDGARV DLGFAEGAPA GLALKALGGT LPLTWMVNSL
PLPEAARRQA EWQPDGAGFA RISVMDATGA SDSVVVRLE
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