Gene M446_0338 details

Gene Information

• Locus tag: M446_0338
• Symbol: rplF
• ID: 6130180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium sp. 4-46
• Kingdom: Bacteria
• Replicon accession: NC_010511
• Strand: -
• Start bp: 414890
• End bp: 415423
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641640666
• Product: 50S ribosomal protein L6
• Protein accession: YP_001767343
• Protein GI: 170738688
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCCGCG TAGGCAAGAA GCCCGTGACC GTCCCGGCCG GCGTCACCGC CACGGTCGAC 
GGCCAGAACG TGAAGATCAA GGGCGCGAAG GGCGAATTGT CGTTCCGCGT GCCCGACCTG 
GTCGAGGTCA GCCACGCCGA CGGCGCGATC TCGGTCCAGC CCCGCAGCCA GACCAAGGAG 
GCCCGCGCGA TGTGGGGCCT CTCGCGGGCC CAGGTCGCCA ACCTCATCGA GGGCGTGACC 
AAGGGCTTCG AGAAGAAGCT GGAGATCAAC GGCGTCGGCT ACCGCGCCGC GGTCGCCGGC 
AAGGTGCTCA AGCTGTCGCT CGGCTACAGC CACGACGTCG AGTACGAGAT CCCGGCCGGG 
ATCACGATCA CCACCCCGCG TCCGGTGGAG ATCATCGTGG CCGGCATCGA CAAGCAGCGC 
GTCGGACAGA TCGCCGCCGA GATCCGCGAG TATCGCGGAC CGGAGCCCTA CAAGGGCAAG 
GGCGTGAAGT ACTCCGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRVGKKPVT VPAGVTATVD GQNVKIKGAK GELSFRVPDL VEVSHADGAI SVQPRSQTKE 
ARAMWGLSRA QVANLIEGVT KGFEKKLEIN GVGYRAAVAG KVLKLSLGYS HDVEYEIPAG 
ITITTPRPVE IIVAGIDKQR VGQIAAEIRE YRGPEPYKGK GVKYSDEFIF RKEGKKK