Gene M446_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0246 
Symbol 
ID6134121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp301084 
End bp302805 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content74% 
IMG OID641640573 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_001767251 
Protein GI170738596 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0266042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCG CGCCGACCGG CGCCGCCCCG GCCCGGATCC TCCTCGTCGA GGATTCCGAG 
ACCCAGGCCC TGCAGCTGCG CCTGTTCCTG GAAGGGAGCG GCTTCGCGGT GACGCGCTGC
GCCACCGCGG AGGCGGCCCT CGACGCCCTG AACCAGGGCC TGCCCGACCT CGTCGTGGCC
GATTACCACC TCCCGGGCAT CAACGGCGAC GAGCTCACCC GCCAGATGCG CCTGTCGCTG
CGCACCCGCG CCACGCCGGT GCTGATGCTG ACCGAGGCGC AGGGGCGCGA CCTGGAGCGC
CAGGGGCTGG AGAGCGGCGC CGACGCCTAC GTGCCGAAAT CCGCCGACCG CGACCTCCTC
GTCCTGCGCA TCCGCGCGCT GCTGCGCGAG CGCGGCGCGG GCACCGCCCA GGAGGCGGGG
CACGGGGCCT TCCGGCGCGC CCGCATCCTG GTCGTGGACG CGAGCGCGAC CTACCGGGCC
TACCTCGCGG GCCTGTTCGG GCAGGACGGC CACGCGGTCG TGGCGGCCGA GGGCCCGGAC
CAGGCCCTGG CGGCGCTGGC CGCGCCCGAC GCGGCCTTCG ACTGCGTCAC CGTCGATCTG
CTCTCCACGG CCTACGAGGC GGTCGAGCTG TGCCGGCGCG TCGCTTCCCT GCGGGAGTCG
GCGGGCGGCC CCGGCTTCTA CCTCGTGGGG ATCGGCAGCG CCGCGGCGGC CGGCAAGGAC
CTGCTGGTCC AGGCCTTCGC GGCGGGGGTC GACGACGTGG TGCCGAAGGG CGCCGAGGGC
GAGGTGCTGG CGATCCGGGT GCGCACGCTG GTGCGCCGCA AGCTCCTGGA GGAGGACAAC
CGCCGGGTCG CGGACGAGCT GCGCCAGCAC GAGCGGGCGG TGGAGCGCGC CCAGGCCGAG
GCCGCCGCCG CCGAGGCCAA GGCGGCGCTG GCCGGCGCCC TGGAGCGGGC CAACCGCGAC
CTCGCCGATG CCAACCGCCA GCTCAAGGAC GCGCAGGCCA AGCTCGTCCA GGCGGCCAAG
ATGGCCTCGC TCGGCGAGCT CGTCGCCGGC ATCGCCCACG AGATCAACAA CCCGCTCGCC
TTCATTCTCG CCCACCAGGG CACGGTCGAG CGCTTGGTCG GCGAGGTGGC GGAGCAGGCC
GAGGGGCTGC CCGAGCCGGC GCGCCGGGCG CTCGCCAAGG CCCGCGACCG GATCGGCGCG
ATGCGGCTCG GCCTCGGTCG GATCCAGGAC CTCGTCGTCA ACCTGCGCAA GTTCTCCCGC
CTCGACGAGG GCGAGATGCG GAGCGTCAAC GTGCCGGACG CGATCGAGAC CGTGCTCGCC
CTGCTGCAGC ACAAGCTCGG CACCCGCATC GCCGTCGAGC GGCTTTTCGC GGGCGAGCCG
GAGATCCGCT GCACGCCCGC CCTCCTCAAC CAGGTCGTCA TGAACATCAT CGGCAACGCC
GCGGACGCGA TTCCGGGCGA GGGCCGGATC ACCGTCGAGA CGCTGAGCGA GGCGGAGAAC
GACGTGATCC GGATCAGCGA CACCGGCCCG GGGGTGCCCG AGGCCCTGCG CGAGCGAATT
TTCGAACCCT TCTTCACGAC GAAGCCGGTC GGCTCCGGCA CCGGCCTGGG CCTCGCCATT
GCCTACAGCG TGGTTCAGGC GCATAGCGGC ACCATCTCGG TCGAGACGGC GCCCGGCGGC
GGCGCCTGCT TCGTGATCAG CATTCCGCGG CGGCCCGCAT GA
 
Protein sequence
MRAAPTGAAP ARILLVEDSE TQALQLRLFL EGSGFAVTRC ATAEAALDAL NQGLPDLVVA 
DYHLPGINGD ELTRQMRLSL RTRATPVLML TEAQGRDLER QGLESGADAY VPKSADRDLL
VLRIRALLRE RGAGTAQEAG HGAFRRARIL VVDASATYRA YLAGLFGQDG HAVVAAEGPD
QALAALAAPD AAFDCVTVDL LSTAYEAVEL CRRVASLRES AGGPGFYLVG IGSAAAAGKD
LLVQAFAAGV DDVVPKGAEG EVLAIRVRTL VRRKLLEEDN RRVADELRQH ERAVERAQAE
AAAAEAKAAL AGALERANRD LADANRQLKD AQAKLVQAAK MASLGELVAG IAHEINNPLA
FILAHQGTVE RLVGEVAEQA EGLPEPARRA LAKARDRIGA MRLGLGRIQD LVVNLRKFSR
LDEGEMRSVN VPDAIETVLA LLQHKLGTRI AVERLFAGEP EIRCTPALLN QVVMNIIGNA
ADAIPGEGRI TVETLSEAEN DVIRISDTGP GVPEALRERI FEPFFTTKPV GSGTGLGLAI
AYSVVQAHSG TISVETAPGG GACFVISIPR RPA