Gene M446_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0093 
Symbol 
ID6130636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp105547 
End bp106815 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content72% 
IMG OID641640433 
Productmembrane-fusion protein 
Protein accessionYP_001767112 
Protein GI170738457 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.149408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.100685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAT CCCCGCAGCG GGCATTCCGG CCGATCGCGC TCGAGCGCGC CGCCTCGCCC 
GAGCAGCTCG ACCACCTCGT CCGCATCACC AAGCCCGCCG ACTGGATCCT CGCCGGCACG
GTGGCGCTGC TGCTCGTCTC GGCCCTGACC TGGAGCGTGG TCGGGCGCGT GCCGACGCGC
GCGGCCGGCG AGGGCATCCT GGTGAGCGTC GGCGGGCGCG TGGTCGACGC GGTCTCGGCC
GCCTCGGGCC GGCTCGCGGC GATCGAGGTG GCGGCCGGCG ACCGGGTCGT CCAGGGCCAG
CCGGTGGCCC GCATCGCCCA GACCGACATC GAGGAGCGCC ACCGCGCCGC CGTCGAGGTC
CATCGCGAGC GCGAGCGCGA GCACGCCACC CTGCGGGCCA AGGTCAAGGA CGAGCTCGCC
GCCAAGGCCC GCAACTTCGC CAAGTTGGAG GAGGCCTTCG ACCAGATCGT CCACGCCACC
GATCAGCGCA TCGAGTATCT GTCGACCGAG GTGAGGAACC TGGAGACGCT GCTCGGCAAG
GGCATCACCA CGCGCCGGGT GGTCGAGGAC CGGCGCCGCG AGCTGACGGA GGCGCGCCAG
CGGCGCGAGG ACGCGCAGAA CGAGGTGCTG AAGCTGCGCA CCCAGAAGAC CGATCTGGAG
ACCCAGCGCG AGCGCGAATT GCAGGACTCG CAGTTCCGCC TCAACGACAC CCGCCGCCAG
ATGGAGCAGC TCGCCGGGGA GCTCGGCCGC AACACCCAGG TGCTCAGCCC GATCGACGGG
CGGGTCCTGG AGGTCAAGGT CTCGCCGGGC TCCGTCCTCA CGGTCGGCAT GCCGGTGATC
GCGGTCGAGA GCGAGGGCAA GGCGCTGGAG GCGGTGGTCT ACATCCCGGC CGACAAGGGC
AAGACCGTGA AGCCCGGCAT GGAGACCCGG CTCGAGCCCA GCACCGTCAA GCGCGAGGAA
TACGGCACCC TGGTCGGCAG CGTGGTGTCG ATCTCCGACT TCCCGATCAC CCCGCAGGGC
ATGGCGGCGG TGCTGCACAA CGACCGCCTG GTGAGCCGCT TCTCGCAGGA GGGCGCGCCC
TACGCGGCCC TGGTGCGGCT GCAGCCCGAC CCCGCGACGG CGAGCGGCTA CGCCTGGGCG
GTGGGGCGGG GCCCCGACCT GCGCCTGACC AGCGGCACGC TGGTGCGGGC CGAGATCACC
ACGCGCCAGC ACCGCCCGCT CGACCTCGTC GTGCCGATGC TCAAGCGCCT CACCGGCCTC
GCCGGGTAA
 
Protein sequence
MSSSPQRAFR PIALERAASP EQLDHLVRIT KPADWILAGT VALLLVSALT WSVVGRVPTR 
AAGEGILVSV GGRVVDAVSA ASGRLAAIEV AAGDRVVQGQ PVARIAQTDI EERHRAAVEV
HREREREHAT LRAKVKDELA AKARNFAKLE EAFDQIVHAT DQRIEYLSTE VRNLETLLGK
GITTRRVVED RRRELTEARQ RREDAQNEVL KLRTQKTDLE TQRERELQDS QFRLNDTRRQ
MEQLAGELGR NTQVLSPIDG RVLEVKVSPG SVLTVGMPVI AVESEGKALE AVVYIPADKG
KTVKPGMETR LEPSTVKREE YGTLVGSVVS ISDFPITPQG MAAVLHNDRL VSRFSQEGAP
YAALVRLQPD PATASGYAWA VGRGPDLRLT SGTLVRAEIT TRQHRPLDLV VPMLKRLTGL
AG