Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0093 |
Symbol | |
ID | 6130636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 105547 |
End bp | 106815 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641640433 |
Product | membrane-fusion protein |
Protein accession | YP_001767112 |
Protein GI | 170738457 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.149408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.100685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCAT CCCCGCAGCG GGCATTCCGG CCGATCGCGC TCGAGCGCGC CGCCTCGCCC GAGCAGCTCG ACCACCTCGT CCGCATCACC AAGCCCGCCG ACTGGATCCT CGCCGGCACG GTGGCGCTGC TGCTCGTCTC GGCCCTGACC TGGAGCGTGG TCGGGCGCGT GCCGACGCGC GCGGCCGGCG AGGGCATCCT GGTGAGCGTC GGCGGGCGCG TGGTCGACGC GGTCTCGGCC GCCTCGGGCC GGCTCGCGGC GATCGAGGTG GCGGCCGGCG ACCGGGTCGT CCAGGGCCAG CCGGTGGCCC GCATCGCCCA GACCGACATC GAGGAGCGCC ACCGCGCCGC CGTCGAGGTC CATCGCGAGC GCGAGCGCGA GCACGCCACC CTGCGGGCCA AGGTCAAGGA CGAGCTCGCC GCCAAGGCCC GCAACTTCGC CAAGTTGGAG GAGGCCTTCG ACCAGATCGT CCACGCCACC GATCAGCGCA TCGAGTATCT GTCGACCGAG GTGAGGAACC TGGAGACGCT GCTCGGCAAG GGCATCACCA CGCGCCGGGT GGTCGAGGAC CGGCGCCGCG AGCTGACGGA GGCGCGCCAG CGGCGCGAGG ACGCGCAGAA CGAGGTGCTG AAGCTGCGCA CCCAGAAGAC CGATCTGGAG ACCCAGCGCG AGCGCGAATT GCAGGACTCG CAGTTCCGCC TCAACGACAC CCGCCGCCAG ATGGAGCAGC TCGCCGGGGA GCTCGGCCGC AACACCCAGG TGCTCAGCCC GATCGACGGG CGGGTCCTGG AGGTCAAGGT CTCGCCGGGC TCCGTCCTCA CGGTCGGCAT GCCGGTGATC GCGGTCGAGA GCGAGGGCAA GGCGCTGGAG GCGGTGGTCT ACATCCCGGC CGACAAGGGC AAGACCGTGA AGCCCGGCAT GGAGACCCGG CTCGAGCCCA GCACCGTCAA GCGCGAGGAA TACGGCACCC TGGTCGGCAG CGTGGTGTCG ATCTCCGACT TCCCGATCAC CCCGCAGGGC ATGGCGGCGG TGCTGCACAA CGACCGCCTG GTGAGCCGCT TCTCGCAGGA GGGCGCGCCC TACGCGGCCC TGGTGCGGCT GCAGCCCGAC CCCGCGACGG CGAGCGGCTA CGCCTGGGCG GTGGGGCGGG GCCCCGACCT GCGCCTGACC AGCGGCACGC TGGTGCGGGC CGAGATCACC ACGCGCCAGC ACCGCCCGCT CGACCTCGTC GTGCCGATGC TCAAGCGCCT CACCGGCCTC GCCGGGTAA
|
Protein sequence | MSSSPQRAFR PIALERAASP EQLDHLVRIT KPADWILAGT VALLLVSALT WSVVGRVPTR AAGEGILVSV GGRVVDAVSA ASGRLAAIEV AAGDRVVQGQ PVARIAQTDI EERHRAAVEV HREREREHAT LRAKVKDELA AKARNFAKLE EAFDQIVHAT DQRIEYLSTE VRNLETLLGK GITTRRVVED RRRELTEARQ RREDAQNEVL KLRTQKTDLE TQRERELQDS QFRLNDTRRQ MEQLAGELGR NTQVLSPIDG RVLEVKVSPG SVLTVGMPVI AVESEGKALE AVVYIPADKG KTVKPGMETR LEPSTVKREE YGTLVGSVVS ISDFPITPQG MAAVLHNDRL VSRFSQEGAP YAALVRLQPD PATASGYAWA VGRGPDLRLT SGTLVRAEIT TRQHRPLDLV VPMLKRLTGL AG
|
| |