Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0042 |
Symbol | |
ID | 6135427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 45341 |
End bp | 47500 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641640385 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001767064 |
Protein GI | 170738409 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.18474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0082739 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGGGACA ATCTGGGATC GTCCGAATCC GAATTCGCGG CTATCATTGC CGCCAGAATG CATCGCGCGG TCAATGGCGA AGACGTCTTC TCCGTTGCGG CCGAGGTGAT TCATCAGCAG ACGACAGCGA TTGATCTCGA CGGATACATG ATGTCGATGA GCGGCCGCTG CGCGCGCCGG GTCTTCGGGA GCGGGGCGGC CTCGCGGCGG GGCGGCCTCG CCGAAGCCGG TCCTTGGCTC GTGGCGGGGG GCGAGACCGG TCCGGTCCGG CAGCGGGCGG AGGAGGGCGG CACGATCCTG CGGCAGCGCC TCGTCTCCGA CTCCCTCCTG CTCGGCGGGC TGGTCCTGGC CGGCCCCGAC CTCGGCCCCG CCGACGAGCG CCGCTGCGCC GTCCTCGCCC GGCTGACGGC CGACGCCCTG TCCGGGCTGC ACCAGCGGCG CCTCTCGCAG CTCGTGCTGG AGTCCCTGGA GCAGAGCGAG GAGGCGGTCT CCTTCTACGA CGAGGAGGAG GGCATCGTCT TCACCAACGA TGCGTATCAC CGCATCTTCC CGCATTATCC GGACCGCCGG GCCCTGCGCG GCGCGCACCA TCTCGACCTC TACCGGCTCG ACCTCGACGC CGGCATCATC GACGATCCCC TGGCGCGGGC GGATCCCGAG ACCTACCTCG CTGAGCGGGC GCGGAAATCG CGCCTGCTGA CCGATCGGCA GCGGGAGATC CAGCGCGTCG GCGGCCGGAC CTACATCTAC ACGCGCACGC GTTCCAGGAC GGGCGCGACC CTGTCGCGGC GCACCGACAT CACCGAGCAG GCCCTGACCG AGGCGCGCCT GCGCGAGCGC GAAGCCGAGT TGCGCACCCT CGCCTTCCAG GATTCCCTCA CCGGCCTGTT CAATCGCGCC TACCTGCGCG AGAAGGTCGA GCAGCTGGAA CGGGCGCTGG CCGAGGGGCG CGTCGCAGGC CTCTGCGTCC TCATGATCGA CCTGAACGGC TTCAAGGCGG TGAACGACAC CTACGGCCAC GATTGCGGCG ACAGGGTGCT CAGGATCGTC GGCGCGCGCC TGTCGGGCAT CCTGCCGCCC GAGGCCGTGC TCATGCGGCT GGGCGGCGAC GAATTTCTCG TCCTGCTGGA GCAGGCCGCC GAGGAACCCG AACTGGCGGC GATGGCCGAG GCGATCATCG CCGCCGTGAC CGAGCCGATC CGTGACGGCG ACCTCGCGCT GAGCGTGGGG GCGAGCATCG GCATCGCCGC GGTGCGCGGC CCGCAGACCG AGATCGACGC GATCATCGGC CGGGCCGACC TCGCGATGTA CGAGGCCAAG TCGCTGCGCT GCAGCGGCTA CCGCTTCTTC CATTCCGGCC TGCGCGAGCA GCGGCTGGCG CAGCTGGCCC TGATCGAGGA CGTGCGCGGG GCCCTGCGCC GCGGCGAGTT CGCGCTGCAC TACCAGCCGC AATTCAGGAC GCAGGATGGC GGCCTCGCGG GCTTCGAGGC CCTGGCGCGC TGGACCCATC CGCGACACGG GCCGATCCCG CCCTCGACCT TCATCCCGAT CATGGAGGAG AACGGGCTCA TCGAGGCCCT GGGCACCTGG ATTCTGGATA CCGCCTGCGC CGAGGCGCGG ACTTGGCCGA CGGACCTGCG GCTCGCCGTC AACGTCTCGC CCCTGCAGGT GCGCAGCGGG CGCTTCTCCC TCACGCTCGC CGAGGCGCTT CTGCGCAGCG GCCTGCCGCC GCATCGGCTC GAACTGGAGA TCACCGAATC GGTGCTGCTC GCCGACGAGG CGCGAAGCCG GGCCGAGCTC GAGCGCTGGA AGGCGCTCGG CGCCCGCATC GCGCTGGACG ATTTCGGGCG CGGCTATTCC GGGCTCGGCT ACCTGACCGC CTTCCCGATC GACAAGATCA AGATCGACCG CGCCTTCCTG GCCGGGTTCG ACGCGCAGCG GCCGGACGCC GCCGCCGGCG TGATCCTCCA CGCGATCATC CGCCTCGGCC GCGTCCTCGG CAAGACCGTG ACGGTCGAGG GTGTCGAGAG CCCCGACCAG CTCGCCCATC TGCGCCGCGA GCGCTGCACC GAGGTGCAGG GCTTCCTGCT GGGCCGCCCG ATGCCCGCCG CGGAGGTTCC CGGCTTCATC GCGCAGCGGG CAGCCCCGTC GGCGGCGTGA
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Protein sequence | MWDNLGSSES EFAAIIAARM HRAVNGEDVF SVAAEVIHQQ TTAIDLDGYM MSMSGRCARR VFGSGAASRR GGLAEAGPWL VAGGETGPVR QRAEEGGTIL RQRLVSDSLL LGGLVLAGPD LGPADERRCA VLARLTADAL SGLHQRRLSQ LVLESLEQSE EAVSFYDEEE GIVFTNDAYH RIFPHYPDRR ALRGAHHLDL YRLDLDAGII DDPLARADPE TYLAERARKS RLLTDRQREI QRVGGRTYIY TRTRSRTGAT LSRRTDITEQ ALTEARLRER EAELRTLAFQ DSLTGLFNRA YLREKVEQLE RALAEGRVAG LCVLMIDLNG FKAVNDTYGH DCGDRVLRIV GARLSGILPP EAVLMRLGGD EFLVLLEQAA EEPELAAMAE AIIAAVTEPI RDGDLALSVG ASIGIAAVRG PQTEIDAIIG RADLAMYEAK SLRCSGYRFF HSGLREQRLA QLALIEDVRG ALRRGEFALH YQPQFRTQDG GLAGFEALAR WTHPRHGPIP PSTFIPIMEE NGLIEALGTW ILDTACAEAR TWPTDLRLAV NVSPLQVRSG RFSLTLAEAL LRSGLPPHRL ELEITESVLL ADEARSRAEL ERWKALGARI ALDDFGRGYS GLGYLTAFPI DKIKIDRAFL AGFDAQRPDA AAGVILHAII RLGRVLGKTV TVEGVESPDQ LAHLRRERCT EVQGFLLGRP MPAAEVPGFI AQRAAPSAA
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