Gene M446_0040 details

Gene Information

• Locus tag: M446_0040
• Symbol: leuD
• ID: 6135425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium sp. 4-46
• Kingdom: Bacteria
• Replicon accession: NC_010511
• Strand: +
• Start bp: 43426
• End bp: 44028
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641640383
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001767062
• Protein GI: 170738407
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00442875
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGAAAAGT TCACCGTTCT CGAAGGCGTC GCGGCGCCGC TGCGGATCGT CAACGTCGAC 
ACCGACCGCA TCATCCCCAA GCAGTATCTC AAGACCATCA AGCGCACCGG CCTCGGCAAG 
GGCCTGTTCT CGGAGATGCG CTACCGGGAC GACGGCTCGG AGAACCCGGA CTTCGTTCTC 
AACCAGCCCG CCTATCGCAA CGCCAAGATC CTGGTGGTGG GCGATAATTT CGGCTGCGGC 
TCCTCGCGCG AGCACGCCCC GTGGGCGCTC GCGGATTTCG GCATACGCTG CATCGTCTCG 
ACCAGCTTCG CCGACATCTT CTTCAACAAC AGCGCCAAGA ACGGCATCCT GCTGATCACC 
GTGGCGCCCG AGGACCTGGA GAAGCTGTTC GACGACGCGG AGCGCGGCGC CAACGCGACC 
CTGACCGTGG ACCTGGAGCG GCAGGAGATC CGCGGGCCGG ACGGCGGGGT GCTCCACTTC 
GACATCGATC CCGCCCGCAA GCACACGCTG CTGAACGGGC TCGACGAGAT CGGCCTCACC 
CTCGAGAAGG CGCCCGCGAT CGAGGCCTAC GAGCGGGCGC TGGCGGACCG CCCCTGGGCC 
TGA 

 

Protein sequence

MEKFTVLEGV AAPLRIVNVD TDRIIPKQYL KTIKRTGLGK GLFSEMRYRD DGSENPDFVL 
NQPAYRNAKI LVVGDNFGCG SSREHAPWAL ADFGIRCIVS TSFADIFFNN SAKNGILLIT 
VAPEDLEKLF DDAERGANAT LTVDLERQEI RGPDGGVLHF DIDPARKHTL LNGLDEIGLT 
LEKAPAIEAY ERALADRPWA