| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0039 |
|---|
| Symbol | |
|---|
| ID | 6135424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 42036 |
|---|
| End bp | 43145 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641640382 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001767061 |
|---|
| Protein GI | 170738406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0051974 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG TTCGCGACGA TCGTCTGGCT GACGCGATCG ATCTGTTCTA CGAGGCGGCG
CTGAACCCGG AGCGCTGGCC GGCGGTGCTG GAGGCCTACG GGCGCGCCGT CGGCGCGGAC
GGCGCCGTGA TGCTGCCCGG GCCGGCGGCG CCGCTCGCGG CCTCGGTGTC GGAGGACATG
GCCGAGGTAG TGGAGGCGGG GGTCCGGGAC GGCTGGCTCG CCGAGAACCC GCGGATCGCG
CGCGGCATCC AGGCCCTGAA GGATCCGCGC GGCGTGATCA CCGAGTCCCA GATCTTCACG
CCGCGGGAAC TCGACCACAT CCCGTTCAAC GCGGATTACG TGGGACGCCA CGGCTACCGC
TGGTTCGCGG GCCTCTACAT GGTGGCGGAG GGGGAGCGCA GCGTCATCCT GTCGGCGGAG
CGCCGCCGCG AGCGCGAGAT GTTCTCGCAC CGGGAGATCG CGCAGATCCG GCGGGCGGTG
CCGCACCTGC AGCGGGCCGG GCAGATCGCC CTGCGGATCG CCGAGGCGCG GGCCGGCGCC
GCGCTCGACG CCTTCGAGAC CCTCCGCTGC GGCGGCCTGC TGCTCGACGC GAGCGGCACG
GTGCTGCGGA TGAACGCCCA CGCCGAGCGG CAGCTCGGCC GCGGCATCGC CGTCGTGAAG
GGGGCGCTGC TCGCCCAGGA TCGGGCGGCG AACGCCGCCC TCGGCCGCCT GATCGCGAGC
GCGATCCGCG CCGGCCGGCC GCACGAGGGG GCGGCCGAGG GGCCGGTGGC GGTGCCGCGG
CCCGAGGGCC CGCCCCTGAT CCTGCACGCG GCCCCGCTCG CCGGGGCGGC GCAGGACCTG
TTCCAGCGCG CCCGCGCGGT GATCCTGGTG GTCGATTCCG CGGCGGGCGG GCGCCCGGGC
GAGGCCCTGC TGCGGCAGGC CTTCGGGCTC ACGGCCGCGG AGGCGCGCCT CGCCCGCGAC
CTCGCCGAGG GGGGCGAACT CGCGGCGGTC GCGGCGGCGC ACGGCATCAC GATCGCCACC
GCGCGCTCGC AGCTCAAGGC CGTCTTCGCC AAGACACGCA CCCACCGCCA GCCGGAACTC
GTCGCGCTGC TGGGGCGGAT GCGGCTGTGA
|
|---|
| Protein sequence | MTDVRDDRLA DAIDLFYEAA LNPERWPAVL EAYGRAVGAD GAVMLPGPAA PLAASVSEDM
AEVVEAGVRD GWLAENPRIA RGIQALKDPR GVITESQIFT PRELDHIPFN ADYVGRHGYR
WFAGLYMVAE GERSVILSAE RRREREMFSH REIAQIRRAV PHLQRAGQIA LRIAEARAGA
ALDAFETLRC GGLLLDASGT VLRMNAHAER QLGRGIAVVK GALLAQDRAA NAALGRLIAS
AIRAGRPHEG AAEGPVAVPR PEGPPLILHA APLAGAAQDL FQRARAVILV VDSAAGGRPG
EALLRQAFGL TAAEARLARD LAEGGELAAV AAAHGITIAT ARSQLKAVFA KTRTHRQPEL
VALLGRMRL
|
|---|
| |