Gene M446_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0017 
Symbol 
ID6128930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp20424 
End bp21575 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content82% 
IMG OID641640360 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001767039 
Protein GI170738384 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.387266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0728154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG TCCCGCTCCC CGGGGCGCGG CGCGTCCTGC CGCTCGCGGC GGCCGCCCTG 
GCCCTCGCCG CGCTGCTCGG CCTGCCGCTC CTGACCCTCG CGCCGAACCG CCTGGTCCCC
GGCACGCCGG TCGGCACCGG CTGGACCGGC CCCGCCGCCG GGTTCCTCGC CCTGGCGGCG
GCGGCGCTGC TCGCGGGCCG GGGGCGCGGC CCGGCGGCGC TGGCCCTCGC GGCGGGGCTG
GCGGCCCTGG CGGTGCTCGC TCTCGGCCTC GGCGCGGCCG CGGCCGGTCA CCTCGCCGGC
CGCCCCCCCG CCGCCCGCGC CTCCCTGGCC TCGGGTGCCT GGATCGCCGC CGCAGCGATC
GGGCTGCTGG CGGTGGAGGC CGCGCGCGCC CTCGGGATCC GGGCCGCCGG CCTCGCCGTC
GCGGCGCTCG CGCTGCTCGG GACGGTGCTC GCGCTCCGGG CCGGGCTCCT CGACGGGGTC
TCGCTGGTGG TCGAGGGCCG CGCGCGCGCC GGGACCCTGA GGGCCGCCCT CGGCGAGCAC
CTCGCCCTCT CGGCCGGCGC CCTCGCCCTC GGCGGCGGCG CCAGCGTGCC GCTCGCCCTG
CTGCGGCTGC GGGGCGGGGC GGGCGCCCGC CTGATCGACG CGGTCCTCAA CGGCGTGCAG
GTCGTGCCCG CCCTCGCGCT CTTCGCCGCC CTGGTCTCGC TCCTCTCGGG CCTGCTCGCC
CTGCTCCCAT CCCTGCGCGG CCTCGGGCTC GCGGCGATCG GGCCGACGCC GGCCATCCTC
GGCACCGCCG CCTACCTCGC CCTCCCGCTG GTGCGCAGCC TCGCCGAGGG CTTGGCCTCG
CCCGATCCGG AGGTGATCGA GACCGCCCGG GCGCTCGGCC TGCGGCCGGT CCAGATCCTC
GCCCGGGTGC GGCTGCCCCT CGGCGCCCCG ATCCTGCTCG GGGGCCTGCG CGTCGCGGCC
GTGCAGGCGA TCGGCCTCAC CACCCTCGGC GGCCTGGTCG GGGCGGGCGG GCTCGGCGCG
GTGGTGTTCG ACGGCATGGC GCAATTCGCC CCCGACCTGA TCCTGCTCGG GGCGGCGCCG
GTGGTCGCGC TGTCGCTCGC GGCGGATCGC GCGCTCGCGG CCCTGCGCCC CGCCCGGGGA
GCCTCCGCGT GA
 
Protein sequence
MSAVPLPGAR RVLPLAAAAL ALAALLGLPL LTLAPNRLVP GTPVGTGWTG PAAGFLALAA 
AALLAGRGRG PAALALAAGL AALAVLALGL GAAAAGHLAG RPPAARASLA SGAWIAAAAI
GLLAVEAARA LGIRAAGLAV AALALLGTVL ALRAGLLDGV SLVVEGRARA GTLRAALGEH
LALSAGALAL GGGASVPLAL LRLRGGAGAR LIDAVLNGVQ VVPALALFAA LVSLLSGLLA
LLPSLRGLGL AAIGPTPAIL GTAAYLALPL VRSLAEGLAS PDPEVIETAR ALGLRPVQIL
ARVRLPLGAP ILLGGLRVAA VQAIGLTTLG GLVGAGGLGA VVFDGMAQFA PDLILLGAAP
VVALSLAADR ALAALRPARG ASA