Gene M446_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0016 
Symbol 
ID6128929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp19693 
End bp20427 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content80% 
IMG OID641640359 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001767038 
Protein GI170738383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0719758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0648485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC TGGTCTCCGC CCTCGGGAGC GCGGCGGTGG GTCTCGCCCT CGCGGCCGCG 
GCGCATCCCG CCGCCGCCGC CGCGATCGCC CGCGCGGTCG GGCTCGGGAC CGGGGCGCCG
GTTCCCCTCG ATCGCCTGCT CTGGCTCGCG CAGCGCCACC TCCTCCTCGC CCTCGGCGGC
TTCGCGCTCG CGGGCGGCCT CGGCCTCGGC CTCGGCATCC TGGCGGTCCG CAGCCGCGAC
GCGCGCCTGC GCGGCGCCAT CGACGCGCTC GCCGCCGCCG CCCAGGCGGT GCCGCCGGTG
GTGGTGATCG GCCTCGCCCT GCCGATCCTG GGCTTCGGCG CGCCGCCGAC GCTCCTGGCC
CTGGCGGCCT ACGGGCTGAT GCCGGTAATG CGCGCCACCA TCGACGCCCT CGCCACGGTC
CCGGCGGAGG TGCGGGACGC CGCCCTCGCC GTGGGGCTCA CCCCCGCGCA GCTGTTCCGG
CAGGTCGACC TGCCGCTCGC GGCCGGGCCG ATCCTGGCCG CCCTGCGGGT CGTGATGGTG
GTCGCGGTCG CGACCGCGGC GGTGGGCGCG CTCGCGGGCG CGCCGACCCT CGGCACCCCG
ATCGTGGTCG GGCTCCAGAA CCAGAACGGC CTCGCGCTGC TGCAGGGCGC CGCGGCCGCG
GCGGCGCTCG CCTTCCTGGC GGACGCGGCC ATGCTCGCGG CCGAGGCGCT GCTTCGGCCG
GTCCCGCCGC GCTGA
 
Protein sequence
MSRLVSALGS AAVGLALAAA AHPAAAAAIA RAVGLGTGAP VPLDRLLWLA QRHLLLALGG 
FALAGGLGLG LGILAVRSRD ARLRGAIDAL AAAAQAVPPV VVIGLALPIL GFGAPPTLLA
LAAYGLMPVM RATIDALATV PAEVRDAALA VGLTPAQLFR QVDLPLAAGP ILAALRVVMV
VAVATAAVGA LAGAPTLGTP IVVGLQNQNG LALLQGAAAA AALAFLADAA MLAAEALLRP
VPPR