Gene M446_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0002 
Symbol 
ID6130434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1863 
End bp2984 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID641640345 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001767024 
Protein GI170738369 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCA CAGTCGAGCG CGCGGCCCTC CTACGGTCGC TCGGCCACGT GCACCGCGTC 
GTCGAGCGGC GCAACACGAT CCCGATCCTG TCGAACGTGC TGCTGCGCTC CAGCGCCGAC
GGCCTGCAGC TGAGGGCGAC CGACCTCGAC ATCGAGGTCA CGGAGACGAT CCCGGCCGAC
GTGGTGGATG GCGGCGCCAC CACGGTGCCG GCCCACGTGA TCTACGACAT CGTGCGCAAG
CTGCCCGACG GCGTCCAGGT CTCCCTGGAG ACGACGGGCG AGACCGGCCA GATGCAGATC
CGCTCGGGCC GCTCGCGCTT CATGCTGGGC GCCCTGCCGG AGGCGGATTT CCCCGACCTC
GCCGCGGGCG AACTGCCCCA CCGCTTCCAG CTCCAGGCCG CCGAGCTGAA GAAGCTGATC
GACAAGACGC AGTTCGCGAT CTCGACCGAG GAGACGCGCT ACTACCTGAA CGGGATCTTC
TTCCACACGA TCGAGACGGA GGCGGGCTTG CGCCTGCGCG CCGTCGCGAC GGACGGGCAC
CGGCTCGCGC GGGTCGAGAT GCCCGCCCCC GAGGGCAGCC GCGGCATGCC GGGCATCATC
GTGCCGCGCA AGGCCGTGGC CGAGATCCAG AAGCTCGTGG AGGATGGCGG CGACAGCGTC
GGGGTGGAAC TCTCGCCCGC CAAGGTCCGC TTCACCTTCT CCAGCGGGGT GACGCTGATC
TCGAAGCTGA TCGACGGCAC CTTCCCGGAT TACCAGCGCG TGATCCCGAC CGGGAACGAC
AAGCTCCTCA CCGTCGAGCG CGAGCAATTC GCCAAGGCGG TCGACCGCGT CTCGACCATC
TCCTCGGAGC GCGGGCGCGC GGTGAAGCTC GCGGTCGGCG GCGGGCGGCT GTCGCTCTCG
GTGAACAACC CGGATTCCGG CAGCGCCACC GAGGAACTCG ACGTCGATTA CGAGGCCGCG
CCCCTCGATA TCGGCTTCAA CGCCCGCTAC CTGCTCGACA TCACGGCGCA GCTCGACGGC
GACAGCGCCC TGTTCAAGCT CGCCGATCCG GGCTCCCCGA CCCTGATCCA GGACAAGGAG
GGGGCGCCGG CCCTCTACGT GCTGATGCCG ATGCGGGTGT GA
 
Protein sequence
MRVTVERAAL LRSLGHVHRV VERRNTIPIL SNVLLRSSAD GLQLRATDLD IEVTETIPAD 
VVDGGATTVP AHVIYDIVRK LPDGVQVSLE TTGETGQMQI RSGRSRFMLG ALPEADFPDL
AAGELPHRFQ LQAAELKKLI DKTQFAISTE ETRYYLNGIF FHTIETEAGL RLRAVATDGH
RLARVEMPAP EGSRGMPGII VPRKAVAEIQ KLVEDGGDSV GVELSPAKVR FTFSSGVTLI
SKLIDGTFPD YQRVIPTGND KLLTVEREQF AKAVDRVSTI SSERGRAVKL AVGGGRLSLS
VNNPDSGSAT EELDVDYEAA PLDIGFNARY LLDITAQLDG DSALFKLADP GSPTLIQDKE
GAPALYVLMP MRV