Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_6076 |
Symbol | |
ID | 6142221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | - |
Start bp | 331316 |
End bp | 332890 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641640125 |
Product | nickel ABC transporter, periplasmic nickel-binding protein |
Protein accession | YP_001766808 |
Protein GI | 170745351 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.814144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGT TGGCGACCCT CGCCGTCGCC GCGATGGCGG CGAGCTTCCT CGGACCGCCC CAGACAGCCG CCGGGCAACT CACCTACTCG TGGCCCTCGA ATGTCGGACC GCTGAACCCG CACCTCTACG CGCCCAACCA GATGTTCGCG CAGGCGAGCG TCTACGAGCC TTTGGTGAAG TACCGCGGTG ATGGATCGGT CGAGCCCTGG CTCGCGACCT CGTGGACCAT CTCTGAGGAC GGGCGGACCT ACGATTTCGT ACTGCGCCCC GGCGTGACCT TCAGTGATGG CACGCCCTTC GACGCGAAAG CGGTCAAGGC GAACTTCGAC GCGATCCTGG CCAACCGTCC GCGGCACGCG TGGCTCGATC TCGTCCAGCA GATCGAACGC ACAGAAGTTG TCGGGCCTCT GGCGTTCCGC CTCGTCCTGA AGGCGCCGCA CTACCCGACG CTGCTCGAAC TTTCCCTGCC GCGGCCCTTC CGGTTCCTGT CTCCGAGCGC CATGGGCCCT GGCGGTACGA CGGCCGTCGG CATCAGGGCG CCGGTCGGCA CTGGGCCGTG GCGGCTCGTC GATACTCAGC TCGGCGTCTC CGACACGTTC GAGAGCACCC CGGGTTACTG GGGCCCGAGA CCCATCTTCG ACCGGCTCGT CGTCAAGGTC ATCCCCGATC CCAACACCCG CGTCATCGCC CTGCAGACGG GGGAGATCGA CTTCGTCTAT GGCGCGGCCG GCCAGATTCC TTCGGAAGCC TTGGTCCGCC TTCGGGACAT GGCCCCGAAC TTTGCCGCAG CGGTCTCGCC GCCGCTGGCG ACCCGGGTGC TGGCGATGAA CTCCGCGCGC TTCCCGACCG ATGATCGGGC GGTCCGCCTC GCCATCAACC ACGCCGTCGA CAAGGACACG CTGGTCCGGA CGGTACTCGA CGGGATCGAG CCGCGCGCGG ACTTCCTGTT TGCGCCGCGC GTGCCGTACG CCGACGTCGG GCTGAAGCCC TACGGCTTCG ACCGGGCCGC GGCCTCCCGC ATGCTCGATG CCGCCGGCTG GACGCTTGGG CGTGACGGCG TGCGTGAGAA GGACGGACGC CGCCTTGCCG TCGAGATCGA TTTCGTCGGG ACAAACGCTC AGCAGCGGGC GATTGCCGAG GTTCTCCAGT CCGATCTTAG CCGCGTGGGC ATCGACGTCC GGCTGATCGG TGAGGAGGAG AGTTCGATCC TGGCCCGCCA GAAGGATGGC CGCTTCGGCC TGATCTTCGG CGAGACCTGG GGGCCGCCCT ACGATCCCGC CTCTTTCATC AGTTCGATGC GCACCCCGTC ACACGCAGAC TATCAGGCGC AGGTCGGGCT GCCGGAGAAG CCGGGCATCG ACGCGACCAT CGCGGAAGTG CTCGCCACGA CCGACGAGAC CGAGCGCCGA CGGCTCTATG CCAAGCTGCT GACCACCCTG CACGAGGCCG CAATCTACCT GCCGATCTCT CACGCCGTGG CCATAGAGGT TCATCGTACC TCGATAACGG ACGTCGGCTT CGGCGCGACG ATCAACGAGA TCCCCTTCGC TGCCATGCGG CCGGCGGCCC GATGA
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Protein sequence | MTKLATLAVA AMAASFLGPP QTAAGQLTYS WPSNVGPLNP HLYAPNQMFA QASVYEPLVK YRGDGSVEPW LATSWTISED GRTYDFVLRP GVTFSDGTPF DAKAVKANFD AILANRPRHA WLDLVQQIER TEVVGPLAFR LVLKAPHYPT LLELSLPRPF RFLSPSAMGP GGTTAVGIRA PVGTGPWRLV DTQLGVSDTF ESTPGYWGPR PIFDRLVVKV IPDPNTRVIA LQTGEIDFVY GAAGQIPSEA LVRLRDMAPN FAAAVSPPLA TRVLAMNSAR FPTDDRAVRL AINHAVDKDT LVRTVLDGIE PRADFLFAPR VPYADVGLKP YGFDRAAASR MLDAAGWTLG RDGVREKDGR RLAVEIDFVG TNAQQRAIAE VLQSDLSRVG IDVRLIGEEE SSILARQKDG RFGLIFGETW GPPYDPASFI SSMRTPSHAD YQAQVGLPEK PGIDATIAEV LATTDETERR RLYAKLLTTL HEAAIYLPIS HAVAIEVHRT SITDVGFGAT INEIPFAAMR PAAR
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