| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6070 |
|---|
| Symbol | |
|---|
| ID | 6142215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 325265 |
|---|
| End bp | 327481 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641640119 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001766802 |
|---|
| Protein GI | 170745345 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.537532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTGC TCCATCCGAC CCCTGCCCCT GTCCGTCGAA GGGTGACCCG CTCGTCACAT
CGCGCCCGAA ACGGCACCGG TCTCGCCCTC GCGGCCGCGC TCGCGGCAGG CGCCCCATCT
AACGAGGCGC GGGCGCAGGA AAGCGTCGCG CTGGAGGAGT TGTCGGTCGC GTCGGTCGGG
ACCGGCGCCC CGTCCAGCAC GACGACCGCC TCCGGCACCA TCGGCCTTAT CGGCCCCACG
CCGGGCTACG GAGCTGGGCG GGCGGTCAGC AGCACCAAGA CCGATACACC GCAGCTGGAT
GTCCCCCAGG TGGTCACAGT CGCGCCGCGC GAGGCCATCA CCGACCTCGC CGCCACCCGG
GTCGACCGGG TTTTCAATTA CCTGCCGGGC GTGGCGCAGC AGAACAACTT CGGCGGCCTG
AGCATCTTCA GCTACGCCAT CCGCGGCGTC ACAACCTCGG AGATCTACCA GAACGGCTTC
CCCCTTAACC GCGGCACGCC GCCCCCGCCC GACGCGCAGA ACATCGAGCG TATCGAGGTT
CTGAAGGGCC CTGGCGCCGG CCTGTTCGGA CGCAGCGATC CGGGCGGGCT CGTCAACATC
ATCACCAAGC AGCCGACCGC ACAGCGCTTC GTCGAGTTCG GCAATCAGGT CGACTCGTTC
GGCCTGACCC GCGGGACGGT CGACGCGGGT GGTCCGCTCA ACGAGGACGG CACCGTCCTC
TACCGCTTCA ACTTCGCGGC CCAGGGCGCA GGAAGCTTCC GCGACTTCGC CGACAGCGAC
CGACTGCTCG TCGCTCCGGT GGTGAGCTGG CAGATCACGC CGGACACGCG CATCACCGTC
GAGGCCGACA TCCAGCGGAA CCGGATCATC TTCGACCGGG GCGTGATCGC CATCAACAAG
CAGCTCGGCT TCCTGCCGAT CTCGCGCTTC CTCGGGGAGC CGGGACAGAG CACCTACCAG
AGCCAGAACA TCCTCCAGGC GCGCATCGAC CACCGCTTCA ACGACGACTG GCAGTTGCGT
CTGGCGACGC ATTTCGCCAC CGGAACGCTG GACGGTGAGT CCGCTGAGAT CCGCTCTATC
GCCTCCGACA ACCGGACGGT GGCCCGCGAC CGAAACGTGC GCGACTATCG CTGGGACGTC
GCGGTCGGGC AGGCGGACCT GATCGGGCGC TTCGACACGG GCGGGATCGG TCATACGCTC
CTGCTCGGTT TCGAGCGCGA GAGTACCGAT AGCCGAACCC TGTACCTGCG CTCGAACTTC
CGCACGAACC CCTACGCCCT CGACATCTAC GCGCCCGTCT ACGGGCAGGC GCTGCCGCCG
CTGACCATCC CGCGCAACAA CCTGGAGCGG GTCACTAACA CCGCCCTCTA CGCCCAGGAT
CAGATCGTGC TCAGCCCGGA GTGGAGGGCG CTCGTGGCCA CGCGGCTCGA CATCTTCGAG
GACTCCTTCC GGGAGCGCAT CCCGCGCAGC CAGGCGGACC AATCGCGGGT CGCGGCCTCC
CCGCGAGCGG GCCTCATTTA CCAGCCGGTC CCCTGGCTAT CGCTCTACAC CAACGTCGGG
ACGAGCTTCC GGCCCAATAT CGGCCCCGAC GCCGCGGCCG TGTCGCCGGG CAAGCCGCTG
AAGCCGGAGA CGGGACAGGG CTACGAGATC GGCGCCAAGG CCGAGCTGTT CGGCGGCAAC
CTGCTGCTGA CTGCGGCGAC CTTCCGGGTG GATCGGCAGA ACGTCCTGAC GCCGGACCCG
AACAACAGCG GCTTCTCGCT CGCGGCAGGG GCCGTGCGCA GCCAGGGCTT CGAGCTGACG
GCGCAGGGGC AGCTCTCGCC GGAGCTGAAG ATCCTGGCCG GCTATGTCTA CGCCGACGCG
GTGGTGACCA AGGACAACGT GCTGCCGGTG GGGGCGCCAC TCATCAACGT GCCGCGCCAC
TCGGGCAGCC TACTCGCCGT ATACGAGGTG CAGGGTGGGG ACTGGAAGGG GTTCGGCATC
GGGGGCGGCG TGCGCGGCGT CGGCGAGCGT CCGGGCGATG CGGCGGGATC CGGTTTCGTC
CTGCCGGCCT ACATCGCGGC CGACGCGCTG GCCTACTACC GCTACGAGAA TATGCGGTTC
GGTCTCAACG TCGAGAACAT CTTCAACACG GTCTACTACG AGAGCTCGCT GAACGTGTTC
CGCGTCTACC CGGGCTCCCC ACGGCGCATC ACCGGGTCGT TCACGGTGCG GTTCTGA
|
|---|
| Protein sequence | MPVLHPTPAP VRRRVTRSSH RARNGTGLAL AAALAAGAPS NEARAQESVA LEELSVASVG
TGAPSSTTTA SGTIGLIGPT PGYGAGRAVS STKTDTPQLD VPQVVTVAPR EAITDLAATR
VDRVFNYLPG VAQQNNFGGL SIFSYAIRGV TTSEIYQNGF PLNRGTPPPP DAQNIERIEV
LKGPGAGLFG RSDPGGLVNI ITKQPTAQRF VEFGNQVDSF GLTRGTVDAG GPLNEDGTVL
YRFNFAAQGA GSFRDFADSD RLLVAPVVSW QITPDTRITV EADIQRNRII FDRGVIAINK
QLGFLPISRF LGEPGQSTYQ SQNILQARID HRFNDDWQLR LATHFATGTL DGESAEIRSI
ASDNRTVARD RNVRDYRWDV AVGQADLIGR FDTGGIGHTL LLGFERESTD SRTLYLRSNF
RTNPYALDIY APVYGQALPP LTIPRNNLER VTNTALYAQD QIVLSPEWRA LVATRLDIFE
DSFRERIPRS QADQSRVAAS PRAGLIYQPV PWLSLYTNVG TSFRPNIGPD AAAVSPGKPL
KPETGQGYEI GAKAELFGGN LLLTAATFRV DRQNVLTPDP NNSGFSLAAG AVRSQGFELT
AQGQLSPELK ILAGYVYADA VVTKDNVLPV GAPLINVPRH SGSLLAVYEV QGGDWKGFGI
GGGVRGVGER PGDAAGSGFV LPAYIAADAL AYYRYENMRF GLNVENIFNT VYYESSLNVF
RVYPGSPRRI TGSFTVRF
|
|---|
| |