Gene Mrad2831_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5833 
Symbol 
ID6142003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp71685 
End bp72833 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID641639888 
Productextracellular ligand-binding receptor 
Protein accessionYP_001766574 
Protein GI170745117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00373072 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTGGCA GGTTCACCCT CACCACCGCG ATCCTGCTGG CGCTGACGGC GACGGGCGCC 
CGGGCGGATG CGATCCGCAT CGGCGTCAAC GAGCCCCTGA CCGGGCCGTT CGCGGCGTCC
GGCACCTACG TGGTGAACGG CGCCAAGATC GCCGCCGACG AGATCAACGC CAAGGGCGGC
GTTCTCGGCA AGAAACTGGA ACTCGTGATC GAGGACAACA AGAGCAACCC GACCGAGGCC
GCCGCGGTCG CCGAGAAGCT GATCACCAGC GACAAGACCC CGGTGATGAT GGGCGCCTGG
GGCTCCAGCC TGACGCTCGC CGTGATGCCG AAGCTCTCGG ATTACGAGAC GCCGATGCTG
GTCGAGACCT CCTCGTCCGG CAAGATCACG ACCTCCGGCA ATCCCTACGT GTTCCGGATC
TCGCCGCCCT CGTCGCTCGA GGCCGAGACC TTCGCGCCGA TGGTTGCGCG CCTGGGGCTG
AAGAAGGTCG ACTTCCTGGT CCTCAACAAC GATTTCGGCC GCGGCGCCGC GACCGACTTC
GGCAAGATGC TGAAGGACAA GGGCGTCGCG GTCGGCCTCG TCGAGACCAT GGACCAGGGC
GCGCAGGACA TGAGCGCCCA GCTCGCCAAA CTGAAGGCGT CGGATTCCGA CACGATCATG
ATCACGAGCT CCGTCGATCA ACTCGTGCTG CTGTTCAAGC AGATGGCGGC GCTCGGCCTG
AAGAAGCGGG TGATCACCAC CGGCGGCTCC CAGAACCCGG ACCAGATCAT CGCCCAGGCC
GGCGCGGCGG CCGACGGCAC GATGCACCTC ACGACCTTCC TGCCCTGGTC GCCCGACAAG
ACGCCGGACC CGAAGGCCAC AGAGGCCTTC ATCGGCGCCT GGAAGAAGCG CGGCTTCGAC
TTCGCGGGCG TCACCGAGAG CTTCCGCGGC TACGACGGCA TCCGCGCGAT CGCCCACGCC
ATCGAGAAGG CGGGCTCGGC CGATCCGGCC GCGATCACCA AGGCCTTCTG GTCGGTCGAC
TTCGTCGGGC TCAACGGCCC GATCCGCTTC GCCAAGGCCG GCCCCGCCGG GAAGGAGAGC
GGCCAGAGCA AGCCCGACGT CTACCTCATC GAGATCAAGG ACGGGAAAGT GATCGTGCCG
GCGCTGTGA
 
Protein sequence
MLGRFTLTTA ILLALTATGA RADAIRIGVN EPLTGPFAAS GTYVVNGAKI AADEINAKGG 
VLGKKLELVI EDNKSNPTEA AAVAEKLITS DKTPVMMGAW GSSLTLAVMP KLSDYETPML
VETSSSGKIT TSGNPYVFRI SPPSSLEAET FAPMVARLGL KKVDFLVLNN DFGRGAATDF
GKMLKDKGVA VGLVETMDQG AQDMSAQLAK LKASDSDTIM ITSSVDQLVL LFKQMAALGL
KKRVITTGGS QNPDQIIAQA GAAADGTMHL TTFLPWSPDK TPDPKATEAF IGAWKKRGFD
FAGVTESFRG YDGIRAIAHA IEKAGSADPA AITKAFWSVD FVGLNGPIRF AKAGPAGKES
GQSKPDVYLI EIKDGKVIVP AL