Gene Mrad2831_5798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5798 
Symbol 
ID6141968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp32014 
End bp34281 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content70% 
IMG OID641639853 
ProductAAA family ATPase, CDC48 subfamily protein 
Protein accessionYP_001766539 
Protein GI170745082 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID[TIGR01243] AAA family ATPase, CDC48 subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.256428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CCGAGGAGCG GGCGCTCAGA TTGCAGGTCG CCAATGCACG CCCCCAGGAT 
TCGGGGCGCG GCATCGCCCG ACTCGGCCAT GCGGCGCTGA CCCAGCTCGG CCTGCGCGAG
GGCGACGTTG TCGAGATCGT CGGCAAGCGC CACACCGCGG CGATCGCGGT CGGTCCCTAC
GATGAGGACG AGGGCCTGAA CCTCGTCCGC CTCGACGGGC TGCAGCGCGT CAACGCCGGC
ACCGCGAGCG GCGACCATGT CGAGATCCAC CCCGCGGAGA TCCGGCCGGC CGCCCGCGTC
GTCGTCGCGC CGGCTCAGAA GAACATGCGC TTGCAGGGTT CGGGGGAGGC CCTGCGCCGC
ACGCTGTTCC GGCGGCCGCT GGTTTCGGGC GACGTCATCT CCACATCGAC TCAGTCGCGC
GCCGCGTCCG ACCCGCGCGT TCCACCGGAG CTGCGCCCCT ATCTCGAGGG GCCGTCCTAC
GGCCTGCAGG AGATCCGCCT CGTCGTCGTC GCCACACAGC CCCGCGGCAT CGTCTACGTG
GCGGAAGGGA CACAGATCGA ACTCCGGCCG CTCTTCGAGG AGCCGAAGGC CGGGCGGCGC
GCCGACGTCA CCTACGACGA TATCGGCGGC CTCGGCGACA CCGTCGATCA GATCCGCGAG
ATGGTCGAGC TGCCCCTGCG CCACCCAGAG CTGTTCCAGC GTCTCGGCAT CGATCCGCCG
AAGGGCGTGC TGCTGCACGG ACCGCCCGGC ACCGGCAAGA CCCGGCTGGC GCGGGCGGTG
GCCAACGAGA CCGAGGCCCG GTTCTTCCAC ATCGCCGGGC CCGAGATCAT GGGCAGCCGG
TACGGCGAGT CCGAGCAGCG CCTGCGCGAG GTCTTCCAGG AAGCCGCTCA GAGCGCGCCC
TCGATCATCT TCATCGACGA GATCGACTCG ATCGCCCCGA AGCGCGAGCA GGTGACCGGC
GAGGTCGAGC GCCGCATCGT CGCGCAGCTC CTCACGCTGA TGGACGGGCT GGAGCCGCGC
CAGAACATCG TGGTGATCGG CGCGACGAAC CGGCGCGACG CCATCGACGA GGCCCTGCGC
CGGCCTGGCC GCTTCGACCG CGAGATCATC ATCGGCGTGC CGGACCAGCC GGGCCGGCGC
GAGATCCTGG GCATCCACAC CCGCGGCATG CCGCTGGCGG AGGATGTCGA CCTGGATGAG
GTCGCGCGCA CCACCTACGG GTTCGTCGGG GCCGATCTCG GCGCGCTGGT GCGCGAGGCC
GCCATGGACG CGGTGCGCCG GATCCTCCCG GAGGTGAACC TGCGCGACGG TATCCCGGCG
GAGATCCTAG AGGGCCTGAG CGTCCGGCGC GACGACTTCC TCTCGGCGAT GAAACGGATT
CAGCCGTCGG CGCTGCGCGA GATCATGATC CAGGTGCCGG ACGTGACCTG GGACGATGTC
GGGGGACTCG CCGAGGCCCA GATGCGCCTG CGCGAGGGCG TCGAGCTGCC GCTGCGGTCG
CCGCAGGCCT TCCGCCGCAT CGGCATCCGG CCGGCCAAGG GCTTCCTCCT GTTCGGGCCA
CCCGGCACCG GCAAGACGCT GCTCGCCAAG GCGGTGGCGC GGGAGTCGGA CGCGAACTTC
GTCGCGACGA AATCCTCCGA CCTCCTGTCG AAATGGTACG GCGAATCCGA GCAGCAGGTC
TCGCGCCTGT TCCAACGCGC CCGGCAGGTG GCGCCGACGG TGATCTTCAT CGACGAGATC
GACAGTCTCG CGCCAGCGCG GGGCGGGGGT CTCGGCGAGC CCGCCGTCAC GGAGCGCGTC
GTCAACACAC TCCTGGCCGA GATGGACGGG CTGGAGGATT TGCAGGGGGT TGTCGTGATG
GCGGCCACAA ACCGCCCGAA CCTGCTCGAC CAAGCGCTGC TGCGTCCGGG ACGGTTCGAC
GAACTCGTCT ATGTGCCGGT TCCGGACATC GCCGGCCGTC GCCGGATCCT GGCCATTCAC
ACGCGGGACA TGCCGCTCGC GGAAGATGTC GATCTCGACG TGATTGCCGA GCGGACCGCC
CGCTTCACCG GCGCGGATCT GGAAGATCTC ACGCGCCGCG CCGGTCTGCT GGCGCTGCGC
GAATCGCTGG AGGCGGCCCA GGTGCAGCGT GCACATTTCG AACAGGCTGC CCGTGAGACC
CGGCCTTCGG TCACACCCGA GATGGAGCGG GAATACGAGG AGATGCTGCG CACCTTGAAG
CAAGAGGGCC CGCAGCGCCA ACCGATCGGC TTCCTATCCC CGCGCTGA
 
Protein sequence
MADAEERALR LQVANARPQD SGRGIARLGH AALTQLGLRE GDVVEIVGKR HTAAIAVGPY 
DEDEGLNLVR LDGLQRVNAG TASGDHVEIH PAEIRPAARV VVAPAQKNMR LQGSGEALRR
TLFRRPLVSG DVISTSTQSR AASDPRVPPE LRPYLEGPSY GLQEIRLVVV ATQPRGIVYV
AEGTQIELRP LFEEPKAGRR ADVTYDDIGG LGDTVDQIRE MVELPLRHPE LFQRLGIDPP
KGVLLHGPPG TGKTRLARAV ANETEARFFH IAGPEIMGSR YGESEQRLRE VFQEAAQSAP
SIIFIDEIDS IAPKREQVTG EVERRIVAQL LTLMDGLEPR QNIVVIGATN RRDAIDEALR
RPGRFDREII IGVPDQPGRR EILGIHTRGM PLAEDVDLDE VARTTYGFVG ADLGALVREA
AMDAVRRILP EVNLRDGIPA EILEGLSVRR DDFLSAMKRI QPSALREIMI QVPDVTWDDV
GGLAEAQMRL REGVELPLRS PQAFRRIGIR PAKGFLLFGP PGTGKTLLAK AVARESDANF
VATKSSDLLS KWYGESEQQV SRLFQRARQV APTVIFIDEI DSLAPARGGG LGEPAVTERV
VNTLLAEMDG LEDLQGVVVM AATNRPNLLD QALLRPGRFD ELVYVPVPDI AGRRRILAIH
TRDMPLAEDV DLDVIAERTA RFTGADLEDL TRRAGLLALR ESLEAAQVQR AHFEQAARET
RPSVTPEMER EYEEMLRTLK QEGPQRQPIG FLSPR