| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3179 |
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| Symbol | trmE |
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| ID | 6124839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 3527850 |
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| End bp | 3529244 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641639772 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001766458 |
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| Protein GI | 170734511 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0373252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000409063 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCTA CCGATTCCGA TCCGATCGTC GCCATTGCCA CTGCTGCCGG CCGGGGCGGC
ATCGGGGTCG TCCGCGTGTC GTTCGGGCGC GGCGGCGAGG CGGCCGCGCT GCCGCTGATC
GACGCGTTGT GCGGACAAAA GCTCGCGCCG CGCCATGCGA GCTACGTGCC GTTCCTCGAC
GCGCACGGCG CGCCGCTCGA CCGCGGGATC GCGCTGTATT TCCCGGCGCC GCATTCGTAC
ACCGGCGAGC ACGTGCTCGA GTTGCAGGGG CATGGCGGGC CGATCGTGAT GCAGCTGCTG
CTGCAGCGCT GCCTCGATGC GGGGCGCGGC TTCGGGCTAC GGCTGGCGGA GCCGGGCGAG
TTCACGCGGC GCGCGTTCCT GAACGACAAG CTCGACCTCG CGCAGGCCGA GGCGGTGGCC
GACCTGATCG AGGCGAGCAC CGAGGCGGCG GCGCGCTCGG CCGGGCGTTC GCTCGACGGC
GCGTTCTCGC GGCAGATCCA TGCGCTCGTC GACGACGTGA TCACGCTGCG GATGCTGGTG
GAGGCGACGC TCGATTTTCC GGAGGAGGAA ATCGACTTCC TCGAAGCGGC CGACGCGCGC
GGCAAGCTCG CGAAGATCCG CGCGCAACTC GCGCACGTGC TCGGCGATGC GCGACAGGGT
GCGCTGTTGC GCGAAGGGCT GTCGGTCGTG CTCGCGGGGC AGCCGAACGT CGGCAAGTCG
TCGCTGCTGA ATGCGCTGGC GGGCGCCGAG CTGGCGATCG TCACGCCGAT CGCCGGCACG
ACACGTGACA AGGTCGCGCA GACGATCCAG GTCGAGGGGA TTCCGCTGCA CATCATCGAT
ACGGCCGGGC TGCGCGAGAC GGAGGACGAA GTCGAGCGGA TCGGCATCGC GCGCACGTGG
AGCGAAATCG AGCGCGCGGA CGTCGTGCTG CATCTGCTCG ATTCGCGTAC GGGGATGACG
CCGGACGACG AGACGATCGC CGCGCGGTTT CCGGCCGGTG TGCCGGTGGT GCGCGTGCTG
AACAAGACGG ATCTGACCGG CGTGCCGGCG TGCGTCGAGC ATCCGGCGGC GGAGGGCGAT
CTGACCGAGG TGCACCTGTC GGCGAAGCGC GGCGACGGGA TCGACATGTT GCGCGCGGAG
TTGCTGCGGA TCGCCGGGTG GCAGGCGGGG GCCGAGGGGG TGTATCTGGC GCGCGAGCGG
CATCTGATCG CGCTGCGGGC CGCGCAGGAA CATCTCGCGC AGGCGGCGGA TCACGCGGAG
CAGCGTGCGC AGTCGCTTGA CCTGTTTGCC GAAGAGCTGC GGCTCGCGCA GGAACAGCTC
AATGCGATTA CCGGGGAGTT CACTTCGGAT GATTTGCTGG GGGTGATTTT CAGCAGGTTT
TGTATTGGGA AGTGA
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| Protein sequence | MLATDSDPIV AIATAAGRGG IGVVRVSFGR GGEAAALPLI DALCGQKLAP RHASYVPFLD
AHGAPLDRGI ALYFPAPHSY TGEHVLELQG HGGPIVMQLL LQRCLDAGRG FGLRLAEPGE
FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLDG AFSRQIHALV DDVITLRMLV
EATLDFPEEE IDFLEAADAR GKLAKIRAQL AHVLGDARQG ALLREGLSVV LAGQPNVGKS
SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ VEGIPLHIID TAGLRETEDE VERIGIARTW
SEIERADVVL HLLDSRTGMT PDDETIAARF PAGVPVVRVL NKTDLTGVPA CVEHPAAEGD
LTEVHLSAKR GDGIDMLRAE LLRIAGWQAG AEGVYLARER HLIALRAAQE HLAQAADHAE
QRAQSLDLFA EELRLAQEQL NAITGEFTSD DLLGVIFSRF CIGK
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