| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3156 |
|---|
| Symbol | |
|---|
| ID | 6124817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3500681 |
|---|
| End bp | 3501463 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641639750 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001766436 |
|---|
| Protein GI | 170734489 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0760439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TCCGCTCCCT CCTGGTCGTC GCGCTGCTGC AGGCTGCCGC GGCCACCAGC
GCGCTGGCTG CCGACGACCT GTCGCAGATC AAGTCGGCCG GCGTGTTCCG CGTCGGCACC
GAAGGCACCT ATGCGCCGTT CACGTACCAC GACGAGACCG GCAAGCTGAC GGGCTTCGAC
GTCGACATCG CGACCGCGAT CGCGCAGCGC CTCGGCGTGA AGCCGCAGTT CGTCGAAGGA
AAATGGGACG GGCTGATCGC GGGCCTCGAC GTGAACCGCT ACGACGCGGT CGTCAACGAA
GTGTCGATCA CCGATGCGCG CAAGGCGAAA TACGATTTCT CGACGCCGTA CATCACGTCG
CACGCGGTGC TGATCGTGCG CGCGGACAAC ACGACGATCC GCTCGTTCGA CGACCTGAAG
GGCAAGAAAT CCGCGAACAC GCTGACCAGC AATTTCGGCA AGCTGGCCGC CGCGCACGGC
GCCGACGTGG TGCCCGTGCA GGGCTTCAAC GAATCGATCG ATCTGCTGAC GTCCGGCCGC
GTCGATGCGA CGATCAACGA TTCGCTGTCG TACCTCGATT TCCGCAAGCA CAAGCCCGAC
GCGAAACTGA AGATCGCGGC GACCGACACG AGCGGCGCGG GCGACGCATC CGGCGTGCTG
CTGCGCAAGG GCAGCCCCGC GCTGGTGGCG GCGATCGACA AGGCGCTCGC GGACATCAAG
GCGGACGGCA CCTACGCGAA GATCTCGCAG AAGTACTTCG GCCGCGACGT GTCGCAGCCG
TGA
|
|---|
| Protein sequence | MKFLRSLLVV ALLQAAAATS ALAADDLSQI KSAGVFRVGT EGTYAPFTYH DETGKLTGFD
VDIATAIAQR LGVKPQFVEG KWDGLIAGLD VNRYDAVVNE VSITDARKAK YDFSTPYITS
HAVLIVRADN TTIRSFDDLK GKKSANTLTS NFGKLAAAHG ADVVPVQGFN ESIDLLTSGR
VDATINDSLS YLDFRKHKPD AKLKIAATDT SGAGDASGVL LRKGSPALVA AIDKALADIK
ADGTYAKISQ KYFGRDVSQP
|
|---|
| |