| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3104 |
|---|
| Symbol | xerC |
|---|
| ID | 6124765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 3444365 |
|---|
| End bp | 3445285 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641639696 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_001766384 |
|---|
| Protein GI | 170734437 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.494742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ATCCGATCGC CGCCTACCTG TCGAACCTGA AGCACGTCAG GCAACTGTCG
GAACACACGC TGCGCGCGTA CACGCACGAA CTCGACGAAC TGAAGAAGCT CGCGGCCGGC
CGGCCGCTCG AAGCATTGAC CGCCGCCGAC ATGCGCGGCG CGGTCGTGCG CGGGCACGCG
GCCGGACTGT CCGCGCGCTC GATCTCGCAC CGCCTTTCCG CATGGCGTGC GTTCTATCGC
TGGTTCGCGC AACGCGTCGA GATGCCCGCG AATCCCGTCG CCGGGGTACG CGCGCCCAAA
CGCGAGAAAT CGCTGCCCAA GGCGCTGTCG GTCGACGATG CGGTCGCACT GATGGACGCG
CCGCTCGCCG GCACGACCGA AGGCATCCGC GACCACGCGA TCCTCGAGCT GTTCTATTCG
TCGGGGCTGC GCCTCGCCGA ACTGGTCGGG CTCGACGTCC GGTACACGCA GGCCGACGGC
TACCGCTCGG CTGGCTGGCT CGATCTCGCC GAAGCCGAAG TCACCGTGCG CGGCAAGGGC
AACAAGGAGC GCAAGGTGCC GGTCGGCAGC AAGGCGATCG ACGCGCTGAA CGCGTGGCTC
GCGGTGCGCG GCGAATTCGT GAAGCACGAT CCGCATCCGC TGTTCGTGTC GGTGCGCGGC
AACCGGATGT CGCCGGGCGT CGTGCGCGAG CGCGTGAAGC GCGCGGCGCT CGCCGCCGGC
ATCCCCGCCA ACGTCCACCC GCACGTGTTG CGCCACTCGT TCGCGACGCA CGTGCTGCAG
TCGAGCGGCG ACCTGCGCGC GGTGCAGGAA CTGCTCGGCC ATGCGAGCGT CGCCGCGACG
CAGATCTATA CGTCGCTCGA CTTCCAGCAT CTCGCGAAGA TTTACGACAG CGCGCATCCG
CGCGCGAAGA AGCGCGACTG A
|
|---|
| Protein sequence | MTDDPIAAYL SNLKHVRQLS EHTLRAYTHE LDELKKLAAG RPLEALTAAD MRGAVVRGHA
AGLSARSISH RLSAWRAFYR WFAQRVEMPA NPVAGVRAPK REKSLPKALS VDDAVALMDA
PLAGTTEGIR DHAILELFYS SGLRLAELVG LDVRYTQADG YRSAGWLDLA EAEVTVRGKG
NKERKVPVGS KAIDALNAWL AVRGEFVKHD PHPLFVSVRG NRMSPGVVRE RVKRAALAAG
IPANVHPHVL RHSFATHVLQ SSGDLRAVQE LLGHASVAAT QIYTSLDFQH LAKIYDSAHP
RAKKRD
|
|---|
| |