| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3052 |
|---|
| Symbol | |
|---|
| ID | 6124713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3390566 |
|---|
| End bp | 3391525 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641639644 |
|---|
| Product | NADH dehydrogenase |
|---|
| Protein accession | YP_001766332 |
|---|
| Protein GI | 170734385 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0275567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCC AGACCGTCGC GCTGCTGGGC GGCACCGGCT TCATCGGCAG CCGGCTCGTC
AATGCGCTGA TCGATGCCGG CAAGCACGTG CGGATCGGTA CACGGCGGCG CGACCACGCG
CGCCACCTGC AGATGCTGCC GGTCGATATC GTCGAGCTCG ACGCGCTCGA TACGCGCACG
CTCGCACGCT TCGTCGCCGG CGCGCACGCG GCGATCAACC TGATCGGCGT GCTGCACGGC
GGCCGTGGCA CGCCGTACGG GCCGGGCTTC GAGCGTGCGC ACGTCGCGCT GCCGGCCGCG
CTTGCGACCG CCTGCAGCGA GGTCGGCGTG CGGCGCCTGC TGCACATGAG CGCGCTCGGC
GCCGATTCGC ACGGCGCGAG CATGTACCAG CGCTCGAAGG GCGACGGCGA AGCCGCGCTG
CATGCAGTCG CGGCCACCGA TTCGCTCGCG CTGACGATCT TCCGTCCGTC GGTCGTGTTC
GGCCCCGGCG ACGCATTCCT CAACACTTTC GCGAACCTGC AGCGCACGGT ACCCGTGCTG
CCGCTCGCGA TGCCCGACGC GCGCTTCCAG CCGGTGTTCG TCGGCGACGT CGTGCGCGCG
TTCGTCAACA CGCTCGATCT CACGGGCGCG CACGGCAAGA CGTACGAGCT CGGCGGCCCG
ACCGTCTACA CGCTCGAGCA ACTGGTGCGC TACTGCGGCA CGCTGGTCGG CCGGCAGGCA
CGCATCGTGC GGCTGCCCGA CGCGCTTGCG CGGCTGCAGG CGAGCGTGTT CGAATGCCTG
CCGGGCGAGC CGGTGCTCAC GCGCGACAAT CTCGCGACGA TGTCGGTGCC GAACGTGCTG
TCGGGGCCGC TCGCGCCGGA ACTCGGGATC TCGCCCGCGA GTCTCGAAAG CATCGCGCCC
GCGTATCTCG GCGAAGCGAC CGGGCGCTCG CGGTTCGACT GGTTCCGCTC GCGTCGCTAG
|
|---|
| Protein sequence | MDRQTVALLG GTGFIGSRLV NALIDAGKHV RIGTRRRDHA RHLQMLPVDI VELDALDTRT
LARFVAGAHA AINLIGVLHG GRGTPYGPGF ERAHVALPAA LATACSEVGV RRLLHMSALG
ADSHGASMYQ RSKGDGEAAL HAVAATDSLA LTIFRPSVVF GPGDAFLNTF ANLQRTVPVL
PLAMPDARFQ PVFVGDVVRA FVNTLDLTGA HGKTYELGGP TVYTLEQLVR YCGTLVGRQA
RIVRLPDALA RLQASVFECL PGEPVLTRDN LATMSVPNVL SGPLAPELGI SPASLESIAP
AYLGEATGRS RFDWFRSRR
|
|---|
| |