Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3017 |
Symbol | |
ID | 6124678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3354226 |
End bp | 3355212 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639609 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001766297 |
Protein GI | 170734350 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCT CCGCTTCCAC CCCTTCCGCG CCGGTGTCGG CCGGCGCCGC GCGCACCGGC GCGGGTCATG CCCGCCGCGG CCGCTTCGCC GCGCTGTCGC GCTTCCTGCC GTCGGGCCGC AGCGTCGCGA TCGGCGTGCC GTTCCTGTGG CTGGCCGTGT TCTTCGCGCT GCCGTTCGTG CTGGTGCTGA AGATCAGCTT CGCCGACCAG GTGATGGGCA TCCCGCCGTA CACGTCGCTC GTCGAGATCA AGGACGGCGT CGTGCACTTC GCGCTGCAGA TGTCGCACTA CGCGTTCCTG CTGCAGGACG ACCTGTACAT CGCGACCTAT CTCAGCTCGC TGAAGATGGC CGCCGTGTCG ACGGTGCTGT GTTTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG CTCGGAGCCG AACCGCCGCA ACGTGCTGAT GATGGCCGTG ATGCTGCCGT TCTGGACGTC GTTCCTGATC CGCGTGTACG CATGGATCGG CATCCTGAAG GACGACGGCC TGCTGAACCA CACGCTGATC GCGCTCGGCA TCATCCACAC GCCGCTGCGG CTCTACCACA GCGATGCGGG CGTCTATATC GGCATGGTCT ATTCGTACCT GCCGTTCATG GTGATGCCGC TCTATGCGCA CCTCGTGAAG ATGGACCTGA CGCTGCTCGA AGCCGCGTAC GACCTCGGCG CGAAACCGTG GGTCGCGTTC ACGCGCATCA CGCTGCCACT GTCGAAGAAC GGGATCATCG CCGGCAGCCT GCTGGTGTTC ATCCCGGCGG TGGGCGAGTA CGTGATCCCG GAGCTGCTCG GCGGCGCCGA CACGCTGATG ATCGGCCGCG TGATGTGGGA TGAATTCTTC AACAACATGG ACTGGCCGAT GGCGTCCGCG GTGACGGTCG CGATGGTGCT GCTGTTGCTG GTGCCGATGG CGCTGTTCCA GTACTACCAG GTCAAGGAAC TAGGAGACGC GAAATGA
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Protein sequence | MRTSASTPSA PVSAGAARTG AGHARRGRFA ALSRFLPSGR SVAIGVPFLW LAVFFALPFV LVLKISFADQ VMGIPPYTSL VEIKDGVVHF ALQMSHYAFL LQDDLYIATY LSSLKMAAVS TVLCLLIGYP MAYYIARSEP NRRNVLMMAV MLPFWTSFLI RVYAWIGILK DDGLLNHTLI ALGIIHTPLR LYHSDAGVYI GMVYSYLPFM VMPLYAHLVK MDLTLLEAAY DLGAKPWVAF TRITLPLSKN GIIAGSLLVF IPAVGEYVIP ELLGGADTLM IGRVMWDEFF NNMDWPMASA VTVAMVLLLL VPMALFQYYQ VKELGDAK
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