| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2991 |
|---|
| Symbol | |
|---|
| ID | 6124652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 3328738 |
|---|
| End bp | 3330585 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641639583 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_001766271 |
|---|
| Protein GI | 170734324 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC TCCCCTCCGA TTCCGCTGTC GCCCGCACTA CGCGCCTGAT CGCGGAGCGC
GCGCTCGCCG CCGTGTTCCA GCCGATCGTC GACCTCGGAT CGGGGACGGT CATCGGTTAC
GAAGGGCTGA TCCGCGGCCC GCGCGGCACC GAACTCGAGC CGCCCGCCGC GCTGTTCGCG
CAGGCCGCGC GCGAAGGCGA AACCATCGCG CTCGAACGGG CCGCCGCGCT CACCTGCCTC
GACGCGTTCG CGGCGCTCGG CTGCGACGGC AAGCTGTTCC TCAATTTCAG CGCGGGCACC
ATCCTCACGC TCGCCAGCGA ACGCGAGCGC GCACGTCAAT TCCTCGGCCG CGCGCGGATC
GGCGCGGAGC GCATCGTGAT CGAGCTCACC GAGCAGAACG CGATTCCCGA TCTCGCGGAC
ATCGGGCCGG CGGTCGCATC GTTGCGCGAC GCCGGCATCC AGTTTGCGCT CGACGACTAC
GGCACCGCGA ACGCCAGCAT GAACCTGTGG CTGCGCCTGC ATCCGGACGT CGTGAAGATC
GACCGCTTCT TCATCCACGA CATCGCGCGC GATCCGCTCA AGTTCGAAGC CGTGAAGGCG
ATGCAGCACT TCGCGCAGGC GAGCGGCGCG AAGCTGATCG CGGAAGGCAT CGAGAACGAA
TGCGACCTGA TCGTCGTGCG CGACATGGGC ATCTGCTGCG TGCAGGGCTT CCTGCTCGGC
CGGCCGAACG CACAGCCGTC GCGGGTGGTC GCGCCGGCCG CGCGCGACGC GATCCGCGCG
CCGCACATCG CGGTGTTTCC CGGCGTGACG CGCGCGATGC GGCCGGCCGG CACGATCGCC
GGGAAGATGC TCGTGCCCGC CCCGGCGCTG CCGCGCGACG CGACCAGCAA CGACGTGCTC
GACCTGTTCA ACCGGATGCC CGACCTGCAC GCGGTCGCGC TCGTCGAGCG CGGGCGGCCG
GTCGCGCTCG TGAATCGGCG CGGCTTCATC GACCGCTTCG CGCTGCCGTA TCACCGCGAG
GTGTTCGGCA AGAAGCCGTG CCTGCAGTTC GCGAACGACG CGCCGCTGAT GATCGACAAC
GCGACCACCT TCGAGCAGCT CGCGATGCTG CTCGCGAGCC ACGACCAGCG CTATCTCGCC
GACGGCTTCG TGATCACCGA GCACGGCCGC TATGTCGGGC TCGGCACCGG CGAGAGCCTG
GTACGCGCGG TGACCGAGAT GCGCATCGAG GCCGCGCGCT ACGCGAATCC GCTGACCTTC
CTGCCCGGCA ACATCCCGAT CAGCGCGCAC ATCGACCGCC TGCTCCAGCG CGACGCCGGC
TTTCACGCGT GCTACGTCGA CCTGAACCAG TTCAAGCCGT TCAACGACCA GTACGGTTAC
TGGCAGGGCG ACGAAGTGCT GAAGTTCGCC GCGACGGTGC TGGCCGGCGT GTGCGATCCG
CAACGCGACT TTCTCGGCCA CGTCGGCGGC GACGATTTCC TCGTGCTGTT CCAGCGCGAC
GACTGGCGCG AGCGCGCCGC CGACGCGATC GCGCGCTTCA ACGACGGCGC GCAACTCTTC
TACACGCAGG TCGACCGGCA GGCGGGCGGG CTGCGCGGCG AGGACCGCCA CGGCAATCCG
GCGTTCTTCG GCTTCGTGAC GATGGCGATC GGCGCGGTCG GCGTGCCGGC CGGCGCGCAC
GGCGCGAAAC GCTACGGCAG CGACGAGATC GCGTCGGTCG CGGCGCTCGC GAAGCGGCGG
GCGAAGCAGC AGCCGGACGG GCTCGCGGTG GTCGATCTCG ATGCCGGCCG CGCCGCGCTG
CGCGATCGCG GCGAACCGCC GGCCGTGGCG GTGGCGGTGG CGGGCTGA
|
|---|
| Protein sequence | MPALPSDSAV ARTTRLIAER ALAAVFQPIV DLGSGTVIGY EGLIRGPRGT ELEPPAALFA
QAAREGETIA LERAAALTCL DAFAALGCDG KLFLNFSAGT ILTLASERER ARQFLGRARI
GAERIVIELT EQNAIPDLAD IGPAVASLRD AGIQFALDDY GTANASMNLW LRLHPDVVKI
DRFFIHDIAR DPLKFEAVKA MQHFAQASGA KLIAEGIENE CDLIVVRDMG ICCVQGFLLG
RPNAQPSRVV APAARDAIRA PHIAVFPGVT RAMRPAGTIA GKMLVPAPAL PRDATSNDVL
DLFNRMPDLH AVALVERGRP VALVNRRGFI DRFALPYHRE VFGKKPCLQF ANDAPLMIDN
ATTFEQLAML LASHDQRYLA DGFVITEHGR YVGLGTGESL VRAVTEMRIE AARYANPLTF
LPGNIPISAH IDRLLQRDAG FHACYVDLNQ FKPFNDQYGY WQGDEVLKFA ATVLAGVCDP
QRDFLGHVGG DDFLVLFQRD DWRERAADAI ARFNDGAQLF YTQVDRQAGG LRGEDRHGNP
AFFGFVTMAI GAVGVPAGAH GAKRYGSDEI ASVAALAKRR AKQQPDGLAV VDLDAGRAAL
RDRGEPPAVA VAVAG
|
|---|
| |